Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1050 ATGGCATCGCAAGAGTCATCCGACGCCATTGCTGGGTTGACCAAGCTTCTCAGTGAGAAAGCTGAATTGGGATGCATGGCCGCCGCGAGGATCAGGCAGTTGACGGCGGAGCTAGAGGCCATGGGCGACAACCCGTTTTATCCAGAGCCCAGGATCAAAACCGGCTTCAATTATTTCAAGAAAGAAAAATTCGAGAAGAATAGAGGTTTATTTGAGCAACTTGCGAAGGGGCAGAGTCCAAAGTTTATGGTATTTGCATGCTCAGACTCAAGAGTGTGTCCGTCGCATGTTCTGGATTTTCAACCAGGCGAAGCCTTTGTTGTCAGAAATATCGCCAACATGGTCCCACCTTATGACAAGATAAAGCATGCAGGAGCTGGAGCAGCCATTGAATACGCAGTCTTACATTTGAAGGTGGAGACAATAGTGGTGATGGGACATAGCTGCTGTGGAGGCATAAAGGGACTCATGTCTATCCCTGATGACGGCACCACTTCCTCTGAGTTCATAGAGCAATGGGTCCAAATTTGTAATCCAGCAAGGTCCAGAATTAAAGCAGACACCAACAAATCAAGTTTCGAAGACCAGTGCACCAACTGTGAGAAGGAAGCAGTGAACGTATCGCTGGGGAACTTGTTGACGTATCCATTTGTGAGAGAAGGGGTGTTGAAGAAAAAACTGAGTTTGAAGGGAGCTCATTACGATTTCATTAATGGAACCTTTGAGTTGTGGGATCTTGACTTCAAGATTAATCCTTCTCTCTCTGTCTGA 771 0.4656 MASQESSDAIAGLTKLLSEKAELGCMAAARIRQLTAELEAMGDNPFYPEPRIKTGFNYFKKEKFEKNRGLFEQLAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNIANMVPPYDKIKHAGAGAAIEYAVLHLKVETIVVMGHSCCGGIKGLMSIPDDGTTSSEFIEQWVQICNPARSRIKADTNKSSFEDQCTNCEKEAVNVSLGNLLTYPFVREGVLKKKLSLKGAHYDFINGTFELWDLDFKINPSLSV 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1050 256 Pfam Carbonic anhydrase 83 240 IPR001765 GO:0004089|GO:0008270
Alju09g1050 256 SUPERFAMILY beta-carbonic anhydrase, cab 51 252 IPR036874 GO:0004089|GO:0008270
Alju09g1050 256 CDD beta_CA_cladeB 55 244 IPR045066 GO:0004089|GO:0008270
Alju09g1050 256 PANTHER CARBONIC ANHYDRASE 48 247 IPR001765 GO:0004089|GO:0008270
Alju09g1050 256 FunFam Carbonic anhydrase 37 256 - -
Alju09g1050 256 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 2. 131 151 IPR015892 GO:0004089|GO:0008270|GO:0015976
Alju09g1050 256 Gene3D Carbonic anhydrase 49 256 IPR036874 GO:0004089|GO:0008270
Alju09g1050 256 SMART Pro_CA_2 75 245 IPR001765 GO:0004089|GO:0008270
Alju09g1050 256 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 87 94 IPR015892 GO:0004089|GO:0008270|GO:0015976
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1050 Alju-ChrAlju09 32903493 32907039 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g1050 09 32903493 32907039 Alju12g1423 12 35468505 35472385 CCT
Alju09g1050 09 32903493 32907039 Alju09g1050 09 32903493 32907039 ECH