Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1043 ATGCCTCGGTATCCACCTCCTTATGGAACTATGGTTCGTCCTTCATTTCCTCCACGCCCACCTGGAGCTGTTAATGTACTTCCAGCTGTATCACGCCCTACTGTTGCAGGGATTCCTCCTGTTCGCCCCGTCATTCCACCTGTGGTTAGACCAGTGGTTGCTCCTAGTATTACACCAGCTGATAAACCGCAAACTACAGTTTATATTGGAAAAATTGCATCAACTGTGGAAAATGAATTTATGCTTTCATTACTTCAGTTATGTGGACCTATCAAGAGTTGGAAACGCCCTCAAAATCCAACAAGTGGAACTCCTTTAAGCTTTGGATTTTGGGAGTTTGAGTCTGCTGAAGGTGTACTCCGTGCATTGCGTCTACTCAATAAATTGAATATTGATGGGCAAGAATTAACGGTCAATCCTAATGACGCGACAAAAGAATATCTGGAGAAGTATATTAAGAAGAAAAATGAGAACTTGCAAAAGGATACTCAGGCTGTTGGATCTGAGAAAGATGATGAGTGTGCCAAACCTTCGAATGCAAAAGAGGAGGGAAAGCCTGAGGATAGTAAGTCAGGGAACAAGGAAAATCATAATGTGGCAAATCTCAGTATCATTAGTGATGAAGACAAGGAAGCTGATAGAGAGGCTTTAGAGAAGATTACAAACATGATAGAAGAGAGACTGAAGACAAGACCTTTACCTCCACCTCCTGCACAGGCATCTCCTGATGGCCCTGCTAACTCAGCTTTGGAACAACCTTCAAAAGGAAGAGATGGAGACTCTGATGCAGAGACAGTGAATAATGAAGCGGGTGATGATAAAAATGACAAGGAGACAAATAGTGAGAACAAAGCAACCAGTGAACATGATAGGCCTGAGACCCCTGATAGAAGGCATGATAGGAAGAGCAGAGAAAGAGACCGAGATAGAGAACTAAAACGAGAAAAGGATAGGGAACTTGAAAGATATGAAAGAGAAGCAGAGCGGGAACGCATCAGGAAAGAGAGGGAACAAAGGAGGAGGATCGAGGAGGCTGAGCGCCAATATGAAGCATGCTTGAAGGATTGGGAGTATAGAGAAAGAGAGAAAGAGAAAGAACGTCAATATGAGAAGGAGAAGGAGAAAGAACGGGAGCGCAAACGTAGAAAGGAGATACTTTATGATGAAGATGAAGAGGACGATGATTCAAGGAAGAGGTGGCGCAGAAGTGTGTTAGATGAGAAACGAAAGAAAAGATTGCGTGTAAAGGAAGAGGACCTGGCTGACAGACAAAAGGAAGAGGAAGAAATTGCTGAGGCCAAAAGGAGGGCCGAGGAGGATCAACAGTTGAAGCAGCAGAGAGATGCACTGAGGCTATTTTCTGAGCATGTGAATGGTGGTGAAAAAAGTATGGCTACTGAGGATATGACTAATCAAGCCAAAAATATTGTTACTGAACAAGAAACTGTAGCTGACCATGGTTATGAAGGCCATACAGGTGATGGTAATCCACTAAATGGAATCAGTGATGAAACCATGGCATCAGTTGCTGTTTCTGATGCACGACAGAGTGGCAATGCCCCTGCTAAGAAGTTGGGTTTTGGTTTGGTTGGTTCTGGGAAAAGAACTACTGTTCCTTCTGTCTTCCATGAGGAGGAGGAGGAGGATGCACACAAGGATAAAAAGATGAGGCCTCTGGTTCCAATTGATTACTCAACTGAAGAGCTGCAGGCTGTTCAACCAACTGTTTCTGGGGCCCCACCTGCAAATTTGGCTGCAGCTGCAGAATTTGCCAAGCGTTTATCCACTGCCAATATCAAGGAAGATAAGGTAGATGGAGAGTGGGATAGAAGTAGGCGTTCTAGTGAGAAGGCTAACCACCGAGATAGGAACAGGAATGATGAAGATGGCTCTCACAACAAAGATGAAAGCAGGGAAAAGATTTCTGACCGAGAAAGGGATCGAGATCGTGGGTCGGAGAAACTGAAGACGACATCAGACAACAAAAAGCTATTAGATGCGAAACAGTTGATTGATATGATACCAAAGACCAAAGATGAGCTCTTCTCATATGAGATAAATTGGGCAGTGTATGACAAGCACCAGCTGCATGAAAGAATGAGACCGTGGATATCAAAGAAGATCACAGAGTTCTTGGGGGAAGAAGAAACGACATTGGTAGATTACATAGTTTCAAGTACGCAGGAACATGTGAAAGCATCCCAGATGCTGGAGCTGCTTCAATCCATTTTAGACGAAGAAGCTGAAATGTTCGTTCTCAAGATGTGGAGGATGCTTATTTTTGAAATAAAGAAGGTAGAGACAGGCCTTGCGTTGAGATCAAAATCTTGA 2331 0.4367 MPRYPPPYGTMVRPSFPPRPPGAVNVLPAVSRPTVAGIPPVRPVIPPVVRPVVAPSITPADKPQTTVYIGKIASTVENEFMLSLLQLCGPIKSWKRPQNPTSGTPLSFGFWEFESAEGVLRALRLLNKLNIDGQELTVNPNDATKEYLEKYIKKKNENLQKDTQAVGSEKDDECAKPSNAKEEGKPEDSKSGNKENHNVANLSIISDEDKEADREALEKITNMIEERLKTRPLPPPPAQASPDGPANSALEQPSKGRDGDSDAETVNNEAGDDKNDKETNSENKATSEHDRPETPDRRHDRKSRERDRDRELKREKDRELERYEREAERERIRKEREQRRRIEEAERQYEACLKDWEYREREKEKERQYEKEKEKERERKRRKEILYDEDEEDDDSRKRWRRSVLDEKRKKRLRVKEEDLADRQKEEEEIAEAKRRAEEDQQLKQQRDALRLFSEHVNGGEKSMATEDMTNQAKNIVTEQETVADHGYEGHTGDGNPLNGISDETMASVAVSDARQSGNAPAKKLGFGLVGSGKRTTVPSVFHEEEEEDAHKDKKMRPLVPIDYSTEELQAVQPTVSGAPPANLAAAAEFAKRLSTANIKEDKVDGEWDRSRRSSEKANHRDRNRNDEDGSHNKDESREKISDRERDRDRGSEKLKTTSDNKKLLDAKQLIDMIPKTKDELFSYEINWAVYDKHQLHERMRPWISKKITEFLGEEETTLVDYIVSSTQEHVKASQMLELLQSILDEEAEMFVLKMWRMLIFEIKKVETGLALRSKS 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1043 776 FunFam RNA Binding Motif protein homolog 656 771 - -
Alju09g1043 776 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 67 136 IPR000504 GO:0003723
Alju09g1043 776 Pfam PWI domain 699 762 IPR002483 GO:0006397
Alju09g1043 776 Coils Coil 306 355 - -
Alju09g1043 776 SMART rrm1_1 66 139 IPR000504 GO:0003723
Alju09g1043 776 SMART pwi_2 692 765 IPR002483 GO:0006397
Alju09g1043 776 Gene3D - 58 173 IPR012677 -
Alju09g1043 776 MobiDBLite consensus disorder prediction 204 226 - -
Alju09g1043 776 MobiDBLite consensus disorder prediction 602 658 - -
Alju09g1043 776 PANTHER SPLICING FACTOR PWI DOMAIN-CONTAINING PROTEIN / RNA RECOGNITION MOTIF (RRM)-CONTAINING PROTEIN 1 776 - -
Alju09g1043 776 Gene3D PWI domain 655 771 - -
Alju09g1043 776 CDD RRM_RBM25 65 148 IPR034268 -
Alju09g1043 776 Coils Coil 358 393 - -
Alju09g1043 776 SUPERFAMILY RNA-binding domain, RBD 39 144 IPR035979 GO:0003676
Alju09g1043 776 ProSiteProfiles PWI domain profile. 679 776 IPR002483 GO:0006397
Alju09g1043 776 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 65 143 IPR000504 GO:0003723
Alju09g1043 776 SUPERFAMILY PWI domain 697 764 IPR036483 GO:0006397
Alju09g1043 776 MobiDBLite consensus disorder prediction 162 344 - -
Alju09g1043 776 MobiDBLite consensus disorder prediction 255 344 - -
Alju09g1043 776 Coils Coil 416 443 - -
Alju09g1043 776 MobiDBLite consensus disorder prediction 360 398 - -
Alju09g1043 776 MobiDBLite consensus disorder prediction 539 561 - -
Alju09g1043 776 MobiDBLite consensus disorder prediction 162 194 - -
Alju09g1043 776 MobiDBLite consensus disorder prediction 509 562 - -
Alju09g1043 776 MobiDBLite consensus disorder prediction 413 446 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g1043 09 32780553 32787267 Alju09g1043 09 32780553 32787267 ECH