Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1018 ATGAATCCCTTCTCTTCAGGGACGCGCTTGAGGGACATGATTCGGGCCATACGTGCCTGCAAAACAGCAGCAGAAGAACGTGCTGTTGTGAGAAAAGAGTGTGCTGCCATTCGTGCTGCAATTGATGAAAATGATCGAGACTATAGGCATCGGAATCTGGCGAAGCTTATGTTCATACACATGCTTGGCTACCCAACACATTTTGGTCAAATGGAATGCCTCAAGTTGATTGCGTCTCCTGGATTTCCAGAGAAGAGAATAGGTTATCTTGGCCTTATGTTGCTTCTTGATGAAAGACAAGAGGTTCTTATGTTGGTCACAAATTCATTGAAACAGGATCTCAATCACACAAATCAGTATATTGTTGGACTTGCACTTTGTGCTTTAGGAAACATTTGTTCAGCAGAAATGGCTCGTGATCTTGCACCAGAGGTTGAGAGATTGCTGCAATTTCGAGACCCAAATGTCCGGAAAAAGGCAGCATTATGTACAATAAGAATCATAAAGAAGGTTCCAGACTTGGCAGAAAATTTTATTAATTCTACTGCCGCGTTACTTGGGGAGAAGCATCATGGAGTTTTGATCACTGGGGTTCAGCTCTGTACAGAACTGTGTAAAGTTAGCGCAGAAGCCCTTGAATACTTTAGAATGAAATGCACAGAGAGTGTGGTCAGAAGACTCAAGGACCTAGTTAACAGTCCATACGCACCAGAATATGACATTGCTGGCATCACCGATCCTTTCCTCCATATTAAATTGCTTAAGCTTTTGCGAGTACTGGGTGAAGGCAATGCCGATGCTAGTGACTTAATGAATGACATACTTGCACAGGTGGCTACCAAGACTGAGTCAAATAAAGTTGCGGGAAATGCCATTTTATATGAATGTGTTCAAACAATCATGAGTGTTGAAGATAGTGGTGGCCTACGTGTGCTTGCCATCAATATCCTTGGAAGATTCTTGTCAAACAGTGACAACAATATTAGGTATGTGGCATTAAACATGCTGATGAAGGCTGTAACAGCTGATGCTCAAGCAGTGCAGAGGCATCGTGCAACTATTCTGGAATGTGTAAAGGATTCAGATGCTTCAATTCAGAAAAGAGCTCTTGAACTTGTTTACGTTTTGGTGAATGAAATTAATGTGAAGCCCTTAACAAAAGAGCTAATTGATTATCTTGAAGTCAGTGATCAAGAATTCAGGCCCGACCTTACTGCCAAAATTTGCTCTATAGTTTCCAAGTTTTCTCCAGAGAAGATCTGGTACATTGATCAGATGCTCAAGGTTCTTTCTGAGGCTGGAAACTTTGTAAAAGATGAAGTATGGCATGCATTAATTGTTGTGATAACCAATGCTTATGACCTTCACGGCTACACAGTAAGAGCATTATACAGAGCTTTGCAAACTTCCGCCGAACAGGAAAGTCTTGTTCGAGTTGCAGTGTGGTGCATTGGAGAATATGGGGATATTTTGGTTGAGAATGTTGGAATGCTTGACATAGAAGAACCAATAATGGTGACTGAATCAGATGCTGTGGATATTCTCGAGATGGTTATAAAACGACACACATCAGATCTTACCACAAAAGCAATGGCTTTGATTGCCCTGTTGAAACTTAGTTCACGTTTTCCATCTTGTTCAGAGAGGATCAGGAATATAATTATTCAGTATAAAGGAAACCTGGTGCTTGAATTGCAGCAAAGATCTATAGAATTCAATAAAGTTCTTGCAAATCATCGAAATATTAGTTCTGCACTTGTAGAAAGGATGCCAGTTTTAGATGAAGCAACTTTCATTGGTAGGAAAGCTGGTTCTATGCCGGGCACAGCTTCAACTCCAACAGGACCTTCAGTTAATATTCCAAATGGAGTTGCCAAACCTTCTATGGCTCCTCTTGTAGATCTGCTTGATTTAAGCTCAGATGATGTTCCTGCACCTAGCTCATCTGGTGATGATCTTCTTCAAGACCTTCTTGGTGTTGATTTGCCACCAGCATCACAACAGCTGGGTTCTGGTCAAGCTCCAAAAAGTGGTACCGACGTTCTTTTGGATCTTTTGTCTGTTGGATCACCTTCTGTGCCTACTATGTTTCCTTCTGCACAGAGCCTCTCATCTACAACAGACATCTTATCCTCCAGTATGAATAACAAAACACCAGCTTCACCACTGGATGATCTCACGTCTCTCTCACTTTCTGCAAGAGCAACTTCTAATGCTGGAGCTGCTCCTATGATGGATTTGTTGGATGGCTTGGCCTCCAGTCCTCCAACAGAAAACAATGGACTGGTTTATCCATCTATAACTGCATTTGCGAGCAGCTCCTTGAGGGTGACATTCAATTTCTCCAAAGAACCAGGAAAACCACAAACAACAATTATTCAAGCTACCTTTACGAATTTGACTTCTAATACATATACAGATTTTATTTTCCAGGCAGCGGTTCCTAAGTTTCTTCAATTGCACTTAGATCCGGCTAGTGGCAATGCTCTACCTGCCAGTGGTGATGGTTCCATCACACAAAAATTGAGAGTTACGAACACCCAACATGGAAAGAAAAATCTTATCATGCGTATAAGGATAGCGTACAAGATAAATGGCAAGGATACACTAGAAGAAGGACAAATCAACAACTTTCCTCGTGAGTTAGGAGGCTAA 2655 0.4154 MNPFSSGTRLRDMIRAIRACKTAAEERAVVRKECAAIRAAIDENDRDYRHRNLAKLMFIHMLGYPTHFGQMECLKLIASPGFPEKRIGYLGLMLLLDERQEVLMLVTNSLKQDLNHTNQYIVGLALCALGNICSAEMARDLAPEVERLLQFRDPNVRKKAALCTIRIIKKVPDLAENFINSTAALLGEKHHGVLITGVQLCTELCKVSAEALEYFRMKCTESVVRRLKDLVNSPYAPEYDIAGITDPFLHIKLLKLLRVLGEGNADASDLMNDILAQVATKTESNKVAGNAILYECVQTIMSVEDSGGLRVLAINILGRFLSNSDNNIRYVALNMLMKAVTADAQAVQRHRATILECVKDSDASIQKRALELVYVLVNEINVKPLTKELIDYLEVSDQEFRPDLTAKICSIVSKFSPEKIWYIDQMLKVLSEAGNFVKDEVWHALIVVITNAYDLHGYTVRALYRALQTSAEQESLVRVAVWCIGEYGDILVENVGMLDIEEPIMVTESDAVDILEMVIKRHTSDLTTKAMALIALLKLSSRFPSCSERIRNIIIQYKGNLVLELQQRSIEFNKVLANHRNISSALVERMPVLDEATFIGRKAGSMPGTASTPTGPSVNIPNGVAKPSMAPLVDLLDLSSDDVPAPSSSGDDLLQDLLGVDLPPASQQLGSGQAPKSGTDVLLDLLSVGSPSVPTMFPSAQSLSSTTDILSSSMNNKTPASPLDDLTSLSLSARATSNAGAAPMMDLLDGLASSPPTENNGLVYPSITAFASSSLRVTFNFSKEPGKPQTTIIQATFTNLTSNTYTDFIFQAAVPKFLQLHLDPASGNALPASGDGSITQKLRVTNTQHGKKNLIMRIRIAYKINGKDTLEEGQINNFPRELGG 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1018 884 Pfam Adaptin C-terminal domain 765 879 IPR008152 GO:0006886|GO:0016192
Alju09g1018 884 ProSiteProfiles Gamma-adaptin ear (GAE) domain profile. 762 879 IPR008153 -
Alju09g1018 884 FunFam AP-1 complex subunit gamma 753 882 - -
Alju09g1018 884 Gene3D - 750 882 - -
Alju09g1018 884 Pfam Adaptin N terminal region 27 578 IPR002553 GO:0006886|GO:0016192|GO:0030117
Alju09g1018 884 PANTHER ADAPTIN, ALPHA/GAMMA/EPSILON 11 870 - -
Alju09g1018 884 SUPERFAMILY ARM repeat 25 582 IPR016024 -
Alju09g1018 884 SUPERFAMILY Clathrin adaptor appendage domain 739 881 IPR013041 -
Alju09g1018 884 Gene3D - 2 594 IPR011989 -
Alju09g1018 884 FunFam AP-1 complex subunit gamma 2 594 - -
Alju09g1018 884 PIRSF AP1_gamma 6 882 IPR017107 GO:0005794|GO:0016192|GO:0030121
Alju09g1018 884 SMART alpha_adaptinc2 759 879 IPR008152 GO:0006886|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1018 Alju-ChrAlju09 32254712 32268327 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g1018 09 32254712 32268327 Alju09g1018 09 32254712 32268327 ECH