Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1015 ATGAGGGAGCGATGGAGTCCCAAATCCACGCATGGTGGCTGTGCTATGTGCCATGCGATACTAGTTCGCTTCCGCCGTTACGCTTCTTCGTCTTCTGCATTTTCTCCTTCTCTGCTTCGTAAAGCTCTACCATTTGCTACCTGTGTTTCCTTCTCCTCCGTAGCTCAATCCACATTTCAAGCATCAGCAGCCATGGTGGCTCATGCTAAAGACGAAGCCTATCTCAACACCGTCATCCCCATGCGTATCCAACTCTTCGAGTCCATCAAAGCTCAGCAACTTGCTCATCGCCAATCCCTCCCAGCTGATCCCATCAAGATAACTTTGCTGGATAAGAATGTCAAGGAAGGGAAGAAGTGGGTGACTTCACCCATTGATATTGCCAGAGAGATTTCAAAGAATTTGGCTGCAAACGCTTTGATTGCCAGAGTCAATGGGGTCCTATGGGATATGACAAGGCCCTTGGAAGGTGATTGTGAGCTTCAGATTTTCAAATTTGAAGACGATGAAGGACGTGACACTTTTTGGCATTCGAGTGCTCACATTTTGGGGCAGGCTCTTGAGACGGAGTATGGATGTAAGCTCTGCATTGGACCCTGCACCACTAGAGGAGAGGGATTTTATTATGATGCCTTTTATGGTGACTTGAGTTTGAATGATGATCACTTTAAGCAGATAGAGTCTGTGGCTTCGAAGGCTGCTAAGGATAATCAATCATTTGAACGTATTGAGGTAACTAGAGAGCAGGCACTCAAAATGTTTTCTGATAATAAGTTTAAGGTTGAAATCATCAATGATTTGCCTGCCGACAAAACCATTACTGTATACAGATGTGGTCCCTTGGTTGATCTTTGTCGTGGTCCACATATACCTAGCACGTCCTTTGTCAAAGCACTCGCTTGTTTAAAGGCTTCCTCAGCATATTGGAGAGGGGACAAAGACCGTGAAAGCTTACAAAGAGTTTATGGGATATCTTATCCTGATCAGAAGAGTTTGAAGGAATATATCAAGCGGTTGGAGGAAGCTAAAAAGTATGACCACAGATTGTTGGGTGTAAAGCAGGAACTTATTCTTCATCATGAGTGGAGCCCAGGAAGTTGGTTTTTTCTTCCACATGGCACCCGGATTTACAACAAACTGATGGAATTTATTCGAAATCAATATAGAGAAAGAGGTTACCAAGAGGTTATATCTCCTAATGTATATAATATGGAGCTGTGGGAGCAATCTGGACATGCTGCAAACTACAAGGAGAATATGTTTGTCTTTGAGATTGAAAAGCAGGAATTTGGGTTGAAACCAATGAATTGCCCAGGTCACTGCTTGATGTTTAAGCACAGAGTTCGCTCATATAGAGAACTTCCTCTTCGACTGGCTGATTTTGGTGTTTTGCATCGGAATGAGGCTAGTGGTGCCCTAAGTGGATTGACTCGTGTCAGGAGATTTCAGCAGGATGATGCCCATATCTTCTGCAGGGAGTCCCAGGTAAAGGAGGAAGTAAGAGCTGCGTTGGATTTTATCAATTATGCCTACAACATATTTGGCTTCACCTATGATCTGAAGCTTTCCACGAGGCCGGAGAAATACCTTGGAGATTTATCAACGTGGGATAAGGCTGAAACTGCGCTTAAAGAAGCTTTAGATGAGTTTGGGAAGCCTTGGCAGATAAATGAAGGGGATGGTGCATTCTACGGACCAAAGATAGATATCAGCGTGTCTGATGCGTTGAACAGGAAATTTCAGTGTGCAACTTTGCAGCTTGACTTCCAGCTTCCTGATCGTTTTAAGTTGGAATACTCAGCTGAGGATGAAGCCAAAATTGAAAGACCTGTGATGATACACAGAGCCATTCTAGGATCTGTTGAGCGCATGTTTGCTATATTATTGGAGCATTACAAGGGTAAATGGCCCTTCTGGCTCAGTCCTCGTCAAGCGATTCTTTGCCCTGTGTCAGAGAAATCACAGTCTTACGCTATTGAGGTGCGAGATAAGATTCATCAAGCAGGTTATTATGTTGACGCTGATACAACTGATAGGAAGATTCAGAAAAAGGTGCGTGAAGCTCAGTTAGCACAGTACAACTACATACTGGTGGTTGGAGAGGAGGAAGCTAAGACCGGACAGGTAAGTGTACGTGTTAGAGATAACTCAGATCACAAGGTTATGAGTATTGAGAACCTACTCAAACTCTTCAGTGATGAAGTTGCAGCCTTCCATTGA 2220 0.4387 MRERWSPKSTHGGCAMCHAILVRFRRYASSSSAFSPSLLRKALPFATCVSFSSVAQSTFQASAAMVAHAKDEAYLNTVIPMRIQLFESIKAQQLAHRQSLPADPIKITLLDKNVKEGKKWVTSPIDIAREISKNLAANALIARVNGVLWDMTRPLEGDCELQIFKFEDDEGRDTFWHSSAHILGQALETEYGCKLCIGPCTTRGEGFYYDAFYGDLSLNDDHFKQIESVASKAAKDNQSFERIEVTREQALKMFSDNKFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPSTSFVKALACLKASSAYWRGDKDRESLQRVYGISYPDQKSLKEYIKRLEEAKKYDHRLLGVKQELILHHEWSPGSWFFLPHGTRIYNKLMEFIRNQYRERGYQEVISPNVYNMELWEQSGHAANYKENMFVFEIEKQEFGLKPMNCPGHCLMFKHRVRSYRELPLRLADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCRESQVKEEVRAALDFINYAYNIFGFTYDLKLSTRPEKYLGDLSTWDKAETALKEALDEFGKPWQINEGDGAFYGPKIDISVSDALNRKFQCATLQLDFQLPDRFKLEYSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAILCPVSEKSQSYAIEVRDKIHQAGYYVDADTTDRKIQKKVREAQLAQYNYILVVGEEEAKTGQVSVRVRDNSDHKVMSIENLLKLFSDEVAAFH 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1015 739 SUPERFAMILY Class II aaRS and biotin synthetases 346 629 IPR045864 -
Alju09g1015 739 CDD TGS_ThrRS 105 170 - -
Alju09g1015 739 FunFam Threonyl-tRNA synthetase, mitochondrial 169 326 - -
Alju09g1015 739 CDD ThrRS_core 346 642 IPR033728 -
Alju09g1015 739 NCBIfam threonine--tRNA ligase 176 731 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Alju09g1015 739 ProSiteProfiles Aminoacyl-transfer RNA synthetases class-II family profile. 371 637 IPR006195 -
Alju09g1015 739 PRINTS Threonyl-tRNA synthetase signature 610 623 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Alju09g1015 739 PRINTS Threonyl-tRNA synthetase signature 432 460 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Alju09g1015 739 PRINTS Threonyl-tRNA synthetase signature 465 488 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Alju09g1015 739 PRINTS Threonyl-tRNA synthetase signature 637 649 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Alju09g1015 739 PRINTS Threonyl-tRNA synthetase signature 566 594 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Alju09g1015 739 Pfam Threonyl and Alanyl tRNA synthetase second additional domain 273 322 IPR012947 GO:0004812|GO:0005524|GO:0043039
Alju09g1015 739 SUPERFAMILY TGS-like 105 165 IPR012676 -
Alju09g1015 739 FunFam Threonine--tRNA ligase, cytoplasmic 103 164 - -
Alju09g1015 739 FunFam Threonine--tRNA ligase mitochondrial 1 636 739 - -
Alju09g1015 739 Hamap Threonine--tRNA ligase [thrS]. 170 737 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Alju09g1015 739 Pfam tRNA synthetase class II core domain (G, H, P, S and T) 423 632 IPR002314 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Alju09g1015 739 ProSiteProfiles TGS domain profile. 103 165 IPR004095 -
Alju09g1015 739 Gene3D - 168 325 - -
Alju09g1015 739 PANTHER THREONINE-TRNA LIGASE 76 738 - -
Alju09g1015 739 SUPERFAMILY Class II aaRS ABD-related 630 735 - -
Alju09g1015 739 FunFam Threonine--tRNA ligase 2, cytoplasmic 328 635 - -
Alju09g1015 739 Pfam Anticodon binding domain 644 732 IPR004154 -
Alju09g1015 739 Pfam TGS domain 105 165 IPR004095 -
Alju09g1015 739 SUPERFAMILY ThrRS/AlaRS common domain 167 344 IPR018163 GO:0000166
Alju09g1015 739 Gene3D - 103 164 IPR012675 -
Alju09g1015 739 SMART tRNA_SAD_4 273 322 IPR012947 GO:0004812|GO:0005524|GO:0043039
Alju09g1015 739 Gene3D Bira Bifunctional Protein; Domain 2 326 634 IPR045864 -
Alju09g1015 739 Gene3D - 635 738 IPR036621 -
Alju09g1015 739 CDD ThrRS_anticodon 642 731 IPR047246 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1015 Alju-ChrAlju09 32200815 32213424 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g1015 09 32200815 32213424 Alju09g1015 09 32200815 32213424 ECH