Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0345 ATGAGCAGCCTGGCAGAGGAACACTCGCTAGCGAAAGCTACGAAATTAGTTGAAGATCTTTACCACATCCGAGACACCTTTTTCCCGGAAAATCAAGATGACAAGATCTCCAAACTGCGAGAACAATCCGATCTTGCTCTCAAATTCCTCGATTCTATTCCTCCTGAAGAAAGGAAGTCACCTATGCAACGTGCAACATTTGAGTATTTGAGAGGGAAGATATTGGATGTATGTCCTGACTATAACAAAGAAGCAGAGGATCATCTATCAAAAGCTGTTAAGCTAAACCCATCCCTTGCAGATGCTTGGCTGTGTTTAGGTAACTGCATTTGGAAGAAAGGAGATCTACCTGCTGCTAAAAACTGCCTTAGTCTTGCATTAAGCAAGGGTCCTAACAAGAATATTCTTTGTCAATTATCAATGCTTAAAAGAAAAATGTCACAAGGTGCTGAGAATCAGGCAGAACTTGTTGAGGAAAGCATTCAACATGCCAAGGAAGCTATCACTTTGGATGTCAAGGATGGTTATTCTTGGTATAATCTTGGAAATGCATGCCTTACTAGTTTTTTTGTCTCTGGATCTTGGAATCATAGCAAACTTCAACATTCTGTAAAAGCATATCAAAATGCTGAGAAAGATGAAAGAATGAAGTCCAATCCAGATCTATATTTTAATAGTGCCATTGTCAATAGATATCTGGAGAATTATGAGAGGGCCCTCAGTGGGTTCGAGGCTGCTGCTTTAAAGGATCCAAGTCTAAATGCTGCTGCAGAGGTTCAGAAGATAGTCAGCCTACTTGACAAGTTGGACAATCTTATGAGGGGGGGGCATTTAAAAGCCAAGCGAATGGCAAGTTTGGCCTCATCTTTAGCTACTGTAAATTTGAATCCATCATACAATAGAGCTACAATAGACCATATGTTGGAGGGTCTGAACAGAGCAGTAGCCATAGACGGGAAGGTATTATTCTTTGTTACGAATGACACTGTTGCTCCCCTATACTACTTGCTTTGTGATTCAAACCAAAATTGCTTTGTTCTTACAGTTTATGGCTTACGTGTAGATGTGATCAAGGAAAGAGATCAGCTAACGTTGCTTGATCCATATTTGCGTCAGGTTGATTTTTCATGGAAGGAGAAGCATTACAAGTTCAAGTCTATACGCTTGGACTTCCCTGAACAAGTACTTGTGAATGGAAAAGCTGTGACCCCTCAACAAGTTGTTCACTCGTCAATACAAGCACAACACAAACCTTGA 1257 0.4057 MSSLAEEHSLAKATKLVEDLYHIRDTFFPENQDDKISKLREQSDLALKFLDSIPPEERKSPMQRATFEYLRGKILDVCPDYNKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLPAAKNCLSLALSKGPNKNILCQLSMLKRKMSQGAENQAELVEESIQHAKEAITLDVKDGYSWYNLGNACLTSFFVSGSWNHSKLQHSVKAYQNAEKDERMKSNPDLYFNSAIVNRYLENYERALSGFEAAALKDPSLNAAAEVQKIVSLLDKLDNLMRGGHLKAKRMASLASSLATVNLNPSYNRATIDHMLEGLNRAVAIDGKVLFFVTNDTVAPLYYLLCDSNQNCFVLTVYGLRVDVIKERDQLTLLDPYLRQVDFSWKEKHYKFKSIRLDFPEQVLVNGKAVTPQQVVHSSIQAQHKP 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0345 418 Coils Coil 147 167 - -
Alju09g0345 418 SUPERFAMILY TPR-like 70 244 IPR011990 GO:0005515
Alju09g0345 418 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 25 396 - -
Alju09g0345 418 Pfam Tetratricopeptide repeat protein 5 OB fold domain 299 409 IPR032076 -
Alju09g0345 418 Gene3D - 277 418 IPR038645 -
Alju09g0345 418 SMART tpr_5 65 99 IPR019734 GO:0005515
Alju09g0345 418 SMART tpr_5 220 253 IPR019734 GO:0005515
Alju09g0345 418 SMART tpr_5 100 133 IPR019734 GO:0005515
Alju09g0345 418 Gene3D Tetratricopeptide repeat domain 4 275 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0345 Alju-ChrAlju09 5086571 5094501 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g0345 09 5086571 5094501 Alju09g0345 09 5086571 5094501 ECH