Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1821 ATGGTGGAGCTCTCCTTTGTCTCTAAAGCGAAGTCAGCTTTCCATTCAGCGGCTGCGAAAGCCGAGCGGGTTCTTGTGGACTTGAAATCGGAGCGAGGTCCTGACAAAGAATCGCCCGATAGATTGACTGGGAATCCAGAAGATGAAGCTCATCAGAAAGAGGGTGATTCAAAGCTTCACAGTGAATTGAGGCATATGAAGTGGAGGCCTGCATATAGAGGAATAAAGCAGGATTGGCAAGATAGGATTAAGAACATTCAAATAAGGAGAAAAGAAGTTGAAGAGATGGATGAACTCAGGGTCAGGGATATAACCATGGATGTTCCATTTTATGAAGAAAATTTGCACGACAATAAAAAATATGATCTTGAGACCAAGGTTTCAGAAGCAGTTCCGACGGTTGAAATCTTAACTGCTGCAACTATAGATCCCATTTGTCCATCATCTGTAGTTAAAGATTCCATGCCCCCATCATCTGTACTGAAGCAATTGGCTCTGGCTGTTGAGGCTGGAAGGAAAACAAAGTCAATGGATGATTTTATAGCTTCAACAGGAGGTTCTTCACCTGTTCATGATAGGGCAGGCTTAAGGCTCTCTGCAGTGAAGGCATTAATTTTCCGTGAAAAGGAGGACAAGCTTAATCTCAGTGATGATGAGAAAGTTTTGTATTTGATTAATTCTCTGTTTGATCCAGAGGAGGAGTTTTTCAAAAGGAAGATTAACTACGGTTCAGAGGAAACTGACTTATCATCATTTTCAAGAGATATTCATGGAGCTCCTCTTGAAAGCCTTGTTGTCAAGCTGGCTGAAGTCATCGGAAACTTCAAGAACCTTCGAGAAATGGCTCTGTTTTGGTGTAAATTTGTTGTTAAACTAAGGAAACTTTGGTCTGAGGAGCAATATTTACCCAGAATCCCCTTGGATGAGATTCCTAATTTGAAATCATGCCTCCTATATCAACAACTACAAGTAATAAATTGTTGTATCTCCAGGAAAAGGCACCGTGCTGTTGCTACTGAATCTATGGACTCTATGTTGCTAAAAGCCAGTTCTAATATTGATGAGTTAGCTGATTATAGTGACAGCATTACTTCAAGCCCAGTCCAGTATGCTAGGTTAAGTACTGGGGAGTTTGCTGTTCGACTTGGTGCTGATTGCCCTGCTGGAGATCTGATGTTGTTGGAAACTGGCGAGCCTGTTTATTCTCCTGTTACCCAGGGAGGACCCCTGCTTACAGAAGACCTGATTGACGAAACACAGGAGTTAATGCTGCAGACAAGAAGTTTTGGTACTGCATGCTCTCAACTCCTCTCTGATATTCAGGCTTTCAAGGCTGCAAATCCAGGCTGTATTATGGAAGACTTTGTGAGATGGTATTCTCCTCCTGATTGGAATGAAAGGGAGCCAAGTATGGAGGCCCAAGAATCTTTAAATGGCAGTGATTCATTGTCTAACAGAGGTTCTCTAAGTTTGCGGATGAAAAAAGAAGGCAATTTATGGCGTGAATTTTGGGAAGCAGCTAAACCAGTGCCAGCTGTTAAACAGGCACCTCTATTTGATGAGGATTTGGCAGTGGAGGGCATCCTGAATGCTCTTGAAGACATCCGGCCTTCTGAGCTTTTTGAACAGCTGTTTATTTCTTTGCTTAGTTTAGGATTTGCCATCGCTGAACCTGTGCTATCTGGAAACAGTGACTTCTCAAAAGTGTTCTCTGACTGCAAGGAGTACATTGTAATCAGCTGCCAAGGCAACAATTGGAGTGAGAAAATTGATGACCTTTTCCAGGTATATGAATCCGTGGAGGCAATGTTACTGAATCCTGAGGAAGCACTGAGGATGATGAAGCAGACCAAAGAACCAACCATCATAACTGGTGAACTCAAGGATCGGTTTAAGAGGCTTAGCCTTAAGTTTGGTGGAAAAGATAGATTCTTAAGAAGGGCAATCCCCAAAGACAAGATAAACAATGAAGAGAACCCAATCCGACAATCATTTTCAAATTTCTTTGATAGCAAAACAACTTTATTTTCAAAGAAGCCCAAGCCTGTAGTAACATGCGCTGCTGAGAACCCTCCCTGTCTTGAAAGTGATTGGACGGTTCTCTAG 2106 0.4231 MVELSFVSKAKSAFHSAAAKAERVLVDLKSERGPDKESPDRLTGNPEDEAHQKEGDSKLHSELRHMKWRPAYRGIKQDWQDRIKNIQIRRKEVEEMDELRVRDITMDVPFYEENLHDNKKYDLETKVSEAVPTVEILTAATIDPICPSSVVKDSMPPSSVLKQLALAVEAGRKTKSMDDFIASTGGSSPVHDRAGLRLSAVKALIFREKEDKLNLSDDEKVLYLINSLFDPEEEFFKRKINYGSEETDLSSFSRDIHGAPLESLVVKLAEVIGNFKNLREMALFWCKFVVKLRKLWSEEQYLPRIPLDEIPNLKSCLLYQQLQVINCCISRKRHRAVATESMDSMLLKASSNIDELADYSDSITSSPVQYARLSTGEFAVRLGADCPAGDLMLLETGEPVYSPVTQGGPLLTEDLIDETQELMLQTRSFGTACSQLLSDIQAFKAANPGCIMEDFVRWYSPPDWNEREPSMEAQESLNGSDSLSNRGSLSLRMKKEGNLWREFWEAAKPVPAVKQAPLFDEDLAVEGILNALEDIRPSELFEQLFISLLSLGFAIAEPVLSGNSDFSKVFSDCKEYIVISCQGNNWSEKIDDLFQVYESVEAMLLNPEEALRMMKQTKEPTIITGELKDRFKRLSLKFGGKDRFLRRAIPKDKINNEENPIRQSFSNFFDSKTTLFSKKPKPVVTCAAENPPCLESDWTVL 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1821 701 Coils Coil 76 96 - -
Alju08g1821 701 Pfam Rab3 GTPase-activating protein catalytic subunit 380 533 IPR026147 -
Alju08g1821 701 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 65 683 IPR045700 GO:0005096|GO:0043547
Alju08g1821 701 MobiDBLite consensus disorder prediction 27 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1821 Alju-ChrAlju08 15609227 15615687 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g1821 08 15609227 15615687 Alju07g0916 07 25421796 25423623 CCT
Alju08g1821 08 15609227 15615687 Alju08g1821 08 15609227 15615687 ECH