Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1709 ATGGATGAAGGTGAGGGAGGGTACGGTGAGAGTGGGGATCCGATGGATCAGTTCCATCGCAACGAAGCGATATCAGCTGTAGCTGATGATGGTTTTTTGGCCGAAGAGGACGACGATTACGAGGACCTTTACAACGACGTTAATGTCGGGGAAGGGTTTCTTCAGTCTTTAAGAAAGAACGAGGATTCTGGGTTTCGGAATGAGGAGGTTGAGGAGAAAAAGACTCAATCAGCTAACGTTCCGACGGAAACTGGTGGTGTTTCTATCCCAGGTGTCGGTGTCGGTGGTGGTAGTAGTACTGGTGGTGAGGCTGCCGCTGCGGGGGTTATGGATGCTCTGTCTAGGGTTCCAGGGCGAGCAGATGTGGTTCAAAATCAAGGGTTTAGAGGGAATGAGATGGGTGTGAAAGGTAGTGGCGGATCGGGTACCTCTATGGGGGGTGGTGGTGGGATGAGGGTTGAATTAGGGCAACAACCGAGCAAGTTGAATGAGTTAGAGGAGCAGAGTGCTAATAATAGTGTAGGAGTACAAGGCATGGGGCAGCAACCTCATGGTGGAGTTGTTGGGAACGTGGGAAATGAGAATTTGATGAGGCAAGGTGGTGGAGGAGGAAATCTCAACAGGGCTGGCGGCAATGGGGTTGGGAATAATGCGACTGGTGTCAATGTTGTCAATACTGGAGGAGGAGCTGCTATTCCTGGCGGCGGCGGCGGTGCCGGAAGTGGTGGTGGGGGCACCATTTTATTTGTTGGTGACTTACACTGGTGGACTACTGATGCTGAGTTGGAGGCTGAACTTTGCAAGTATGGGCCAGTGAAGGAGGTGAAATTTTACGATGAGAAGGCTAGTGGGAAGTCAAAAGGGTATTGCCAGGTTGAGTTTTATGATTCTTCTCATGCATCTTCTTGTAAAGAAGGAATGCATGGGCATTTGTTTAATGGGCGGCCATGCGTAGTTGCTTTTGCCTCCCCTTTTACCGTTAAGAGAATGGGAGAGGCTCAGGTGAGCAGGAATCAACAGATAGCCCAATCTACTGGTTCTCAGGCAAGGAGGGGACCTGCTGATTCAGGGGCTAGTAAGACGGGTGGGAGTAACATTACTACTGGTGGAAACTACCAAGGTGGAGATGGCAATAGAGGCTATGGGAGAGGTAACTGGGGGAGAGGGAATAATCCTGGGATGGGAAATAGGGGCCCTGTTAATCCAATGAGGAATAGAGGTGGTGGGATGGGGGGTAGAGGCATCATGGGTAATGGTGGGAATGGATTTGGACAAGGTATTGGTGCCACCCCACCTCTGTTGCATCCTCAGTCAATGATGAGTCAGGGCTTTGATCCTGCATTTGGTGGGCCTATGGGTAGAATGGGTGGCTATGGAGGCTTTCCAGGTGCTCCAACTCCTCCATTCTCTGGTATTTTGCCTTCATTCCCTACAGTTGGAGGTGTTGGTTTGCCTGGAGTAGCACCTCATGTTAATCCAGCCTTTTTTGGGAGAGGGATGCCCATGAATGGTATGGGGATGATGCCCACTTCAACGGTTGATGGGCCTAATATGGGAATGTGGTCAGATCCAAGTATGGGTGGATGGGGCGGTGAAGAGCATGGTGGTGGGAGGGCTGGAGAGTCAAGTTACGGTGAGGAAGCTGCATCAGAACATCAGTATGGTGAGGCGAGTCATGATAGAGGTGGTTGGCCAAATGCCATGAGGGAAAAGGATAGAGGATCAGAAAGGGACTGGTCTGGCTCCTCTGAGCGAAGGTACAAGGATGATAGAGATCAAGGATATGAGAGAGATGCGCCAAGAGAAAAAGAAATGGGGCAGGACCAGGAATGGTCTGAAAGAAGACATCGTGATGATAGAGAAGTAGTTCGTGAACGTGATAGGGAGCGTGACCGTGATCGTGAACGCTCTCGAGATCGTGAACGTGAACGTGAAAGGGATCGTGAAAGAGACCGTGAGCGTGATAGGTACAAGGAAGAAAGGGACAGATATGCTGACCATCATAAGTACAGAGATCGTGAAGCAGACCATGAGGATGAGTGGGAACGGGGACGGTCATCAAGGACTCACAGCAAATCAAGATTATCACAAGAGGACGAGCATCATTCTAGAGCTAGGGATGCTGATTATGGAAAGAGGAGACGTCTTACATCTGAGGACAATTGTATTGAGAAAGGAAGCTGTTCACTCAGACTCTGGCTTGCTTCGGAGATCAAGTGGACCTTTTTGAGTGTCGAAGAGACAAGTCATGACAATCCATTGCCTACATTGAAAAGTGGAACATTTGCTATGAAGTTATTAGCTTTTGTTTTGGATTTATGTTTAGTTCAAATGATAAACCAACTTTGTTGA 2352 0.4923 MDEGEGGYGESGDPMDQFHRNEAISAVADDGFLAEEDDDYEDLYNDVNVGEGFLQSLRKNEDSGFRNEEVEEKKTQSANVPTETGGVSIPGVGVGGGSSTGGEAAAAGVMDALSRVPGRADVVQNQGFRGNEMGVKGSGGSGTSMGGGGGMRVELGQQPSKLNELEEQSANNSVGVQGMGQQPHGGVVGNVGNENLMRQGGGGGNLNRAGGNGVGNNATGVNVVNTGGGAAIPGGGGGAGSGGGGTILFVGDLHWWTTDAELEAELCKYGPVKEVKFYDEKASGKSKGYCQVEFYDSSHASSCKEGMHGHLFNGRPCVVAFASPFTVKRMGEAQVSRNQQIAQSTGSQARRGPADSGASKTGGSNITTGGNYQGGDGNRGYGRGNWGRGNNPGMGNRGPVNPMRNRGGGMGGRGIMGNGGNGFGQGIGATPPLLHPQSMMSQGFDPAFGGPMGRMGGYGGFPGAPTPPFSGILPSFPTVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSTVDGPNMGMWSDPSMGGWGGEEHGGGRAGESSYGEEAASEHQYGEASHDRGGWPNAMREKDRGSERDWSGSSERRYKDDRDQGYERDAPREKEMGQDQEWSERRHRDDREVVRERDRERDRDRERSRDRERERERDRERDRERDRYKEERDRYADHHKYRDREADHEDEWERGRSSRTHSKSRLSQEDEHHSRARDADYGKRRRLTSEDNCIEKGSCSLRLWLASEIKWTFLSVEETSHDNPLPTLKSGTFAMKLLAFVLDLCLVQMINQLC 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1709 783 SMART rrm1_1 247 320 IPR000504 GO:0003723
Alju08g1709 783 MobiDBLite consensus disorder prediction 552 711 - -
Alju08g1709 783 MobiDBLite consensus disorder prediction 515 711 - -
Alju08g1709 783 MobiDBLite consensus disorder prediction 336 374 - -
Alju08g1709 783 MobiDBLite consensus disorder prediction 61 76 - -
Alju08g1709 783 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 246 324 IPR000504 GO:0003723
Alju08g1709 783 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 248 317 IPR000504 GO:0003723
Alju08g1709 783 PANTHER CLEAVAGE AND POLYADENYLATION SPECIFIC FACTOR 20 659 IPR034772 -
Alju08g1709 783 MobiDBLite consensus disorder prediction 336 408 - -
Alju08g1709 783 Gene3D - 241 364 IPR012677 -
Alju08g1709 783 SUPERFAMILY RNA-binding domain, RBD 244 339 IPR035979 GO:0003676
Alju08g1709 783 CDD RRM_CFIm68_CFIm59 248 321 - -
Alju08g1709 783 MobiDBLite consensus disorder prediction 1 23 - -
Alju08g1709 783 MobiDBLite consensus disorder prediction 59 92 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g1709 08 14318311 14322617 Alju08g1709 08 14318311 14322617 ECH