Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1683 ATGAATGCCCAGACCCAGAGTGATGCCGTTGATCACACTTCATTCGCGTCTTTCTCCCCGAGAGGCGATATGGCTTCCGCAGCGATTGTGAATGACACTTCCGATTACTCTGAAAGTGAAGACGAGGAAATTTTAGGATCCGGCAAGAGCGCAGGAGAAGAACTGGAAGACGATTCTGGGTCTGCTTCTGAAGATTCTTTTGATGGCGATAATCCTCTCGCTAATGATATCTTCCAAGAAAGTGACGATGAAGGTACTGCAGAGGAAAGGGATGACTCGGGTCCGAGTACGGACTCGGATTCTGATTCTGATGATGATATTGAGAAAAAGTCAAGAGCTATTGATGAGGAAAGGGCGCGAGAAGAAGAAGATGCAGAAGCTGAAATGAAGCTCAATATTCAAGGGGAATCTGATGAGTTTAGATTGCCGTCCAAGGAGGAACTCGAGGAAGAGGCTTTACGTCCACCTGATCTTCCAAATCTTCAGAGAAGAATCAAAGAGATTGTTCGTGTTCTTTCCAATTTTAAGGCTTTGAGGGAAGAAGGGTCAACAAGAAAGGATTACATTAACCAGCTAAAGAAAGATATATGTTCATATTATGGGTATAATGAGTTTCTTATTGGCGCTTTGGTTGAGCTGTTTCCAGTTGTTGAACTGATGGAATTGATTGAAGCATTTGAAAAGCCACGGCCTATATGTCTAAGGACTAACACTTTGAAGACACGCAGACGGGATTTGGCGGATGTCTTAATAAACAGAGGAGTAAATCTAGATCCTTTAAGTAAATGGTCAAAAGTTGGACTTGTTGTGTATGAATCTCAAGTGCCAATTGGTGCCACTCCTGAGTATATGGCTGGTTTCTATATGCTTCAAAGTGCTAGTTCTTTTCTGCCTGTGATGGCCTTGGCTCCTCAAGAGAAGGAACGGGTTGTTGATATGGCAGCTGCACCTGGTGGTAAAACAACTTATATTGCTGCTCTTATGAAGAATACTGGAATTATTTTTGCAAATGAAATGAAGGTGCCCCGGCTTAAATCACTTACTGCAAATTTGCATCGTATGGGAGTGTCAAACACTGTAGTCTGTAACTACGATGGAAAGGAGCTCCCCAAGGTCTTGGGTCTCAATTCTGTTGATAGGGTGTTATTGGATGCCCCTTGCAGTGGTACTGGGGTTATATCTAAGGATGAGTCTGTGAAAACCTCTAAAAATCTGGAAGATATACAAAAGTGTTCCCATCTACAAAAGCAATTGATTCTTGCTGCTATTGACATGGTGGATGCTAATTCAAAATCTGGGGGTTATATTGTTTATTCGACATGCTCCATCATGGTGGCAGAGAATGAAGCAGTCATTGACTATGCTCTTAAAAAGAGGGATGTTAAACTTGTGCCATGTGGTCTTGACTTTGGGCGACCTGGGTATATAAGGTTTAGGGAACAGCGTTTTCACCCTTCATTGGAAAAGACTAGGCGTTTCTATCCTCATGTTCACAATATGGATGGGTTTTTTGTGGCAAAGTTGAAAAAAATGAGGAACTCAAAGCCAAGTGCGAAACCAGTAGAACTGGCAGAACAGGAGGAAGGTGCCGAGCTTGTGAATGGAGGGGAGATTACAAGTAATGGCGAGAAGCAAGGTTTAGATGCCAAAAGGCGAAATGCAAATGCTAAAAAGCATATTGCGAATGGCAAAAAACAAACTGCAAATGCCAAAAAGCATAATGCAAATGGTGAACAAGCAGCTGAAACCAAAAAGAGGAAGAAAAGGCAATTTCCATCTAGAGAGGAAATTTCAAAAGCCAGGGAAGAGAAGAGGAGAGCTTCAAGAGAAAATAAAGGAAAAAAGGCAGGAAGCAAAAAGGCCAAAACTGGGGATTGA 1878 0.4233 MNAQTQSDAVDHTSFASFSPRGDMASAAIVNDTSDYSESEDEEILGSGKSAGEELEDDSGSASEDSFDGDNPLANDIFQESDDEGTAEERDDSGPSTDSDSDSDDDIEKKSRAIDEERAREEEDAEAEMKLNIQGESDEFRLPSKEELEEEALRPPDLPNLQRRIKEIVRVLSNFKALREEGSTRKDYINQLKKDICSYYGYNEFLIGALVELFPVVELMELIEAFEKPRPICLRTNTLKTRRRDLADVLINRGVNLDPLSKWSKVGLVVYESQVPIGATPEYMAGFYMLQSASSFLPVMALAPQEKERVVDMAAAPGGKTTYIAALMKNTGIIFANEMKVPRLKSLTANLHRMGVSNTVVCNYDGKELPKVLGLNSVDRVLLDAPCSGTGVISKDESVKTSKNLEDIQKCSHLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVAENEAVIDYALKKRDVKLVPCGLDFGRPGYIRFREQRFHPSLEKTRRFYPHVHNMDGFFVAKLKKMRNSKPSAKPVELAEQEEGAELVNGGEITSNGEKQGLDAKRRNANAKKHIANGKKQTANAKKHNANGEQAAETKKRKKRQFPSREEISKAREEKRRASRENKGKKAGSKKAKTGD 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1683 625 PRINTS RNA (C5-cytosine) methyltransferase signature 493 510 IPR023267 GO:0001510
Alju08g1683 625 PRINTS RNA (C5-cytosine) methyltransferase signature 433 449 IPR023267 GO:0001510
Alju08g1683 625 PRINTS RNA (C5-cytosine) methyltransferase signature 311 321 IPR023267 GO:0001510
Alju08g1683 625 PRINTS RNA (C5-cytosine) methyltransferase signature 379 391 IPR023267 GO:0001510
Alju08g1683 625 PRINTS RNA (C5-cytosine) methyltransferase signature 282 296 IPR023267 GO:0001510
Alju08g1683 625 FunFam Ribosomal RNA methyltransferase Nop2 189 295 - -
Alju08g1683 625 PANTHER NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING 99 514 IPR023267 GO:0001510
Alju08g1683 625 MobiDBLite consensus disorder prediction 1 155 - -
Alju08g1683 625 ProSiteProfiles SAM-dependent MTase RsmB/NOP-type domain profile. 222 511 IPR001678 GO:0008168
Alju08g1683 625 Gene3D Vaccinia Virus protein VP39 298 619 IPR029063 -
Alju08g1683 625 ProSitePatterns NOL1/NOP2/sun family signature. 378 389 IPR018314 GO:0003723|GO:0008168
Alju08g1683 625 Gene3D Sun protein; domain 3 188 295 - -
Alju08g1683 625 MobiDBLite consensus disorder prediction 42 56 - -
Alju08g1683 625 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 194 510 IPR029063 -
Alju08g1683 625 Pfam N-terminal domain of 16S rRNA methyltransferase RsmF 218 295 IPR031341 -
Alju08g1683 625 PRINTS RNA (C5-cytosine) methyltransferase NOP2 subfamily signature 218 230 IPR023273 GO:0008168
Alju08g1683 625 PRINTS RNA (C5-cytosine) methyltransferase NOP2 subfamily signature 241 254 IPR023273 GO:0008168
Alju08g1683 625 PRINTS RNA (C5-cytosine) methyltransferase NOP2 subfamily signature 185 205 IPR023273 GO:0008168
Alju08g1683 625 MobiDBLite consensus disorder prediction 90 155 - -
Alju08g1683 625 MobiDBLite consensus disorder prediction 577 610 - -
Alju08g1683 625 Pfam 16S rRNA methyltransferase RsmB/F 299 509 IPR001678 GO:0008168
Alju08g1683 625 NCBIfam NOL1/NOP2/sun family putative RNA methylase 234 510 IPR011023 GO:0003723|GO:0006396|GO:0008757
Alju08g1683 625 MobiDBLite consensus disorder prediction 516 625 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1683 Alju-ChrAlju08 13809683 13820094 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g1683 08 13809683 13820094 Alju08g1683 08 13809683 13820094 ECH