Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1636 ATGAGCAGTGAGGCTGTGATTGATCAACGACCTTTCATCGAAGCTTCTTCGTCTTCCTCTTCTAATGTGATTCAACAGCCTCCTCGTAGAACAGGAAACGTGGTGAATGCGGCGGCCCACATAATAACAGCGGTGATAGGAGCAGGAGTGTTGTCTTTGGCATGGTGCATTGCTCAGCTGGGTTGGATTGTTGGCCCTCTCTGCATCCTTGTCTTTGCCGCCGTCACCACCTATGTCTCCTTCCTCCTCTCCGACTGTTACCGCTTCCCTCATCCGCATGGCCCGACCCGTAACCCCTCCCTCATGCATGCCATCAAGCTCTATCTAGGAGGGGAAGGGAAGGTGTTTTGTGGAGTGGTGGTGGTAATCTATAGGTTTGGTACTGCCATTGCCTACGTCATTACTTCTGCTCTCAGCGCCAGGTACTCTTCTCTTGTCTTGTACTTGGACTATGTGGTCCTTTAG 465 0.5161 MSSEAVIDQRPFIEASSSSSSNVIQQPPRRTGNVVNAAAHIITAVIGAGVLSLAWCIAQLGWIVGPLCILVFAAVTTYVSFLLSDCYRFPHPHGPTRNPSLMHAIKLYLGGEGKVFCGVVVVIYRFGTAIAYVITSALSARYSSLVLYLDYVVL 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1636 154 PANTHER OS05G0424000 PROTEIN-RELATED 34 139 - -
Alju08g1636 154 Pfam Transmembrane amino acid transporter protein 31 137 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1636 Alju-ChrAlju08 13240672 13243498 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1636 30 141 Organic Solute Cotransporters AT5G23810 58.407 6.27e-38 127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g1636 08 13240672 13243498 Alju07g1110 07 34311488 34313851 CCT
Alju08g1636 08 13240672 13243498 Alju08g1636 08 13240672 13243498 ECH