Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1503 ATGCAACACGGAGACTACAATTCAGCTCCTTATTATCAATTTCCTCAGATGCAGAACCCAATTCACAATCCTAATCCTAACCCTAACCCTATCCCTCCCGATTCAGTCCCAAATCAATATGCCTCCGCTCCTCCTTTCACCTCCGATTACACGCCTTACGCCTCTACTTATCCTCCATACCCTCAAAATCCCGATCCTATTCCAGTCGCTCCTACTGCCCCTTCATACCCGCCAACCTCCAACCCCAATTTGAACTCTTTCAGTTCTCCTCCCCAACCTTCCTCTTTTCCTCCGTTTGAGTCCCATGTCCCGTATCAACAACCTCCACAACAACAATGTCAATATCCCCCGTATGATCAACATCAGACGACTCCAAGTTATGCACCTTCTTCCTCCGCAATTCCTCCTAACCCCACTCCCAGTTCTTTAACCGCGTCCTTCTATCCGGCTTCGTACTCTCATCCTGGATCATCCATTCCCGCTACATACGAAAGTCCGTACGAGAATTCCTCGAAATTTGATTATGGTGGTACTTATGTCGATGACAAGTATGGAAGTTTTAATCGGAGCCGGTCTGATTTGGGGTCGGATTTGTATGGAAAGCGACCGGATACTAGGCATGATACTGTTCGTGATGATATTTATGGAGATGGTGTGTATGCCTATAGAGGGGGCGAAACGGAACCATATGGAGCACGGGGAACTGCTCCTAAGTCTTCATCTTGGTCCGGCTTTGATGATTATGGAAGGTCAATTAGTTTTCCCTCTGCGAAGGAACCCTCTTTTTCAAACAAGGTTGTGAAAGCTGTGCCTAAGGCTGATGCCCAAGAGGATGTTAAAAGCGCAGTGCAAAAATTTCGTGTGAAGCTATTGGCAGAAAGTGGTGGTCAGAGCACTATGGATGTGCTCTGTCAGATTGGTTTGGATGGAATTCGTATGCTGGATCCAAGTACCAGCCGGACGTTGAGAATTTATCCTCTTGAGAACATCACGAGATGTGACAAATTCGATTCGACTACCCTTGCATTTTGGTCCAAGAGTCCAGTTGACATTGAGCCAAGACGAATCAGATTGCAATCCAATAGTTACACCACTAACACTCTCTTGGATACAGTTACTGCTGCAATCATACAGTTCAAGGAAATGGGTGGAAGCAAGAGGCCTGTTGAATCATTGAAAACAAATGAACAGCCTACGGAGAAGAAGAAAGGCCTTGTTGATTGGGTGAATCTGATCAAACCTGCCAATGAGGAGAAAGATCATTGGGTCCCGGATGAAGCAGTTTCAAAATGCACAGCTTGTGGGACTGATTTTGGGGCTTTTGTTCGCAAGCATCACTGTAGGAACTGTGGGGATATTTTCTGTGACAAATGCACACATGGTAGAATTGCTCTAACTGCTGATGAAAACGCTCAGCCAGTACGAGTTTGTGACCGATGCATGGCTGAAGTGACACAGAGGCTCAGCAATGCGAAAGAGGCTGCAAACAAGCCTGCATTGCAAAGTCATGAGGATCTTGCGAGGAAACTTCGGGAGGAGCTGGATAGGAATCGGAGGACATCAGGTTCCAAGTCCGATGGATCTGGAAGACGGATGAAAGAAGTTGAATGCCCCACTTGTACTGTTCATCTGCAGGTCCAAGTACCTAGCTCGGGTTCAGAGACCATCGAGTGTGGGGTTTGCCAGCACCCATTTCTTGTGAGTGCTCATTGA 1713 0.4688 MQHGDYNSAPYYQFPQMQNPIHNPNPNPNPIPPDSVPNQYASAPPFTSDYTPYASTYPPYPQNPDPIPVAPTAPSYPPTSNPNLNSFSSPPQPSSFPPFESHVPYQQPPQQQCQYPPYDQHQTTPSYAPSSSAIPPNPTPSSLTASFYPASYSHPGSSIPATYESPYENSSKFDYGGTYVDDKYGSFNRSRSDLGSDLYGKRPDTRHDTVRDDIYGDGVYAYRGGETEPYGARGTAPKSSSWSGFDDYGRSISFPSAKEPSFSNKVVKAVPKADAQEDVKSAVQKFRVKLLAESGGQSTMDVLCQIGLDGIRMLDPSTSRTLRIYPLENITRCDKFDSTTLAFWSKSPVDIEPRRIRLQSNSYTTNTLLDTVTAAIIQFKEMGGSKRPVESLKTNEQPTEKKKGLVDWVNLIKPANEEKDHWVPDEAVSKCTACGTDFGAFVRKHHCRNCGDIFCDKCTHGRIALTADENAQPVRVCDRCMAEVTQRLSNAKEAANKPALQSHEDLARKLREELDRNRRTSGSKSDGSGRRMKEVECPTCTVHLQVQVPSSGSETIECGVCQHPFLVSAH 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1503 570 MobiDBLite consensus disorder prediction 512 531 - -
Alju08g1503 570 MobiDBLite consensus disorder prediction 57 78 - -
Alju08g1503 570 MobiDBLite consensus disorder prediction 1 20 - -
Alju08g1503 570 SMART fyve_4 417 486 IPR000306 GO:0046872
Alju08g1503 570 MobiDBLite consensus disorder prediction 1 150 - -
Alju08g1503 570 MobiDBLite consensus disorder prediction 21 39 - -
Alju08g1503 570 PANTHER PROTEIN FREE1 1 570 IPR045893 GO:0036258|GO:0043130
Alju08g1503 570 MobiDBLite consensus disorder prediction 105 130 - -
Alju08g1503 570 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 412 490 IPR013083 -
Alju08g1503 570 Pfam FYVE zinc finger 421 485 IPR000306 GO:0046872
Alju08g1503 570 FunFam Zinc finger, FYVE-type, endofin 412 490 - -
Alju08g1503 570 Coils Coil 500 520 - -
Alju08g1503 570 Gene3D - 268 343 IPR011993 -
Alju08g1503 570 MobiDBLite consensus disorder prediction 40 56 - -
Alju08g1503 570 PRINTS Proline rich extensin signature 129 154 - -
Alju08g1503 570 PRINTS Proline rich extensin signature 93 109 - -
Alju08g1503 570 PRINTS Proline rich extensin signature 66 87 - -
Alju08g1503 570 PRINTS Proline rich extensin signature 18 30 - -
Alju08g1503 570 PRINTS Proline rich extensin signature 52 64 - -
Alju08g1503 570 SUPERFAMILY FYVE/PHD zinc finger 420 491 IPR011011 -
Alju08g1503 570 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 425 485 IPR017455 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1503 Alju-ChrAlju08 11735409 11740410 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1503 413 499 EF-hand Containing Proteins AT3G14270 33.673 8.07e-13 69.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g1503 08 11735409 11740410 Alju08g1503 08 11735409 11740410 ECH