Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1398 ATGGCTCTGTCGAAGACAGCCACGGAGACGGAAGCTTCTGTGCACTCGACGTTCGCGTCGAGGTACGTGAGAGCGCCGCTGCCCAGGTTCAAGATGGCGGAGCATTCGATCCCCAAGGAGGCGGCTTACCAGATCATAAACGACGAGCTCATGCTCGACGGTAATCCCAGGCTCAATCTCGCCTCCTTCGTCACCACCTGGATGGAGCCTGAGTGCGACAAGCTCATCATGTCCGCCATCAACAAGAATTACGTCGACATGGATGAGTATCCAGTCACCACCGAGCTCCAGAATCGGTGTGTGAACATGATAGCCCATCTTTTCAATGCACCGCTTCAAGAATCAGAACCTGCGGTGGGTGTTGGTACAGTTGGCTCATCGGAGGCCATCATGTTGGCTGGCTTGGCTTTCAAGAGAAAGTGGCAGAACAGAAGAAAAGCAGAGGGCAAGCCCATTGACAAACCCAATATTGTCACTGGTGCTAATGTTCAGGTTTGCTGGGAGAAATTTGCGAGGTACTTTGAGGTGGAGCTGAAAGAGGTGAAGCTGAGGGAAGATTACTTCGTCATGGATCCTGAAAAGGCAGTGGAAATGGTGGATGAGAACACAATCTGTGTTGCTGCTATCCTCGGTTCCACGCTCAATGGAGAATTTGAAGATGTCAAACGCTTAAATGATCTCCTCATTGAGAAGAATAATGAAACCGGATGGGATACTCCAATTCATGTAGATGCAGCGAGTGGTGGCTTCATCGCACCATTTATATATCCAGAGCTTGAATGGGACTTTCGCTTGCCGCTTGTGAAGAGCATCAACGTTAGTGGACACAAGTATGGACTTGTGTACGCAGGCATCGGTTGGGTCATTTGGAGAAGTAAGGAAGATTTGCCTGACGAGCTCATCTTCCACATTAACTATCTCGGAGCTGATCAACCCACCTTCACCCTCAACTTCTCCAAAGGTTCTAGTCAAGTCATTGCTCAGTACTACCAGCTCATCCGCTTGGGTTTTGAGGGATATAGGAATGTGATGGAAAATTGCAGAGACAACATGCTAGTGCTGAAAGAGGGATTGGAGAAAACAGGGCGTTTTAACATCATATCAAAAGACGATGGGGTGCCATTAGTGGCCTTCACTTTAAAGGATCGCAGCCACTTCAATGAATTCCAGATCTCAGATTTCTTGAAGCGCTATGGCTGGATCGTTCCGGCCTATACTATGCCTCCCGACGCTCAGAGCGTCACCGTCCTCCGCGTCGTCATCAGAGAGGATTTTTCTCGAACATTCGCCGAGCGTCTCGTCATTGATATTCAGAAAGTCTTGTACGAGCTCGATTTGCTCCCCGGCTGGCCCGTCGTCAGCACCACCGTCAATGTCACAGCGGAGATGGCAGAAAACGGTCATATCGTCGTCAAGAAGAGTGAACTCGAGACCCAAAGGGAAATCACTACGGCTTGGAGGAAGTTCGTGTCCGACAGGAAGAAGATGAACGAGAAGATGAATGGTGTTTGTTAA 1515 0.4944 MALSKTATETEASVHSTFASRYVRAPLPRFKMAEHSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMSAINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLQESEPAVGVGTVGSSEAIMLAGLAFKRKWQNRRKAEGKPIDKPNIVTGANVQVCWEKFARYFEVELKEVKLREDYFVMDPEKAVEMVDENTICVAAILGSTLNGEFEDVKRLNDLLIEKNNETGWDTPIHVDAASGGFIAPFIYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRSKEDLPDELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCRDNMLVLKEGLEKTGRFNIISKDDGVPLVAFTLKDRSHFNEFQISDFLKRYGWIVPAYTMPPDAQSVTVLRVVIREDFSRTFAERLVIDIQKVLYELDLLPGWPVVSTTVNVTAEMAENGHIVVKKSELETQREITTAWRKFVSDRKKMNEKMNGVC 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1398 504 Gene3D - 1 65 - -
Alju08g1398 504 FunFam Glutamate decarboxylase 66 360 - -
Alju08g1398 504 NCBIfam glutamate decarboxylase 16 444 IPR010107 GO:0004351|GO:0006536|GO:0030170
Alju08g1398 504 Gene3D - 66 360 IPR015421 GO:0003824
Alju08g1398 504 CDD DOPA_deC_like 59 439 - -
Alju08g1398 504 Pfam Pyridoxal-dependent decarboxylase conserved domain 36 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
Alju08g1398 504 Gene3D - 361 448 - -
Alju08g1398 504 FunFam Glutamate decarboxylase 1 65 - -
Alju08g1398 504 SUPERFAMILY PLP-dependent transferases 14 443 IPR015424 -
Alju08g1398 504 FunFam Glutamate decarboxylase 361 448 - -
Alju08g1398 504 PANTHER GLUTAMATE DECARBOXYLASE 1 495 IPR010107 GO:0004351|GO:0006536|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1398 Alju-ChrAlju08 10831188 10833260 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1398 1 504 Calmodulin-binding Proteins AT5G17330 82.016 0.0 872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g1398 08 10831188 10833260 Alju08g1398 08 10831188 10833260 ECH