Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1202 ATGGATTGGCACAGTACCTACTCCCCTTGCGTTATTCCGATGGGCCGCCATTCACTGTTGGCTCTCTTGCTCTTTTCCCTCCTATCGGCGGCTGTGGCAACGGCGGAGGGTATCGATGATGAAGATGACCTCCTGATCCGGCAAGTGGTGCCGGACAACGACAATCACTTGCTCAACGCCGAAAACCATTTCTCCATCTTCAAGACCAAGTTCGGCAAGAACTACGCTACCAGAGAGGAGCACGACTATCGTTTTGGTGTCTTCAAAGCAAACTTGCGCCGGGCTAGGCTACACCAGAAACTTGATCCCTCCGCCGTCCACGGCGTCACTAAATTCTCCGATCTTAGTCCATCGGAATTTCGCCGGCAGTACCTCGGCCTCCGACCGCTTCGTCTTCCCGCTGATGCTCATAGGGCTCCAATCCTCCCTACAAGCGATCTCCCCACGGACTTCGATTGGCGAGATCATGGAGCAGTCGCTGAGGTCAAGGACCAGGGAGCATGTGGATCATGCTGGGCGTTTAGTACCGCAGGGGCGTTGGAGGGAGCTCATTTTCTGGCGACTGGCGAGCTTGTGAGCCTTAGCGAACAACAGCTAGTGGACTGCGACCATGAGTGTGATCCAGAAGAAGCTGGAGCATGTGACGCAGGCTGCAACGGTGGGCTGATGAACTCTGCATTTGAATACACCCTGAAGGCCGGTGGGTTGCAGCGAGAAAAGGACTATCGTTACACTGGAACTGATCGTGGTCCCTGCAAACTTGACAAAAGCAAAATTGCTGCTTCCGTGGCTAATTTCTCTGTGATTTCCGTGGACGAAGATCAAATTGCTGCAAATCTGATTAAGCATGGCCCTCTTGCAGTTGGTATAAATGCAGTATTTATGCAGACATACATTGGTGGCGTTTCATGCCCATATATATGCGGAAGGCATTTGGATCACGGGGTTCTTCTGGTGGGCTATGGGTCTGCTGCTTATGCCCCCATCCGCTTTAAGGAAAAACCCTACTGGATCATCAAGAATTCATGGGGAGAGAATTGGGGAGATAATGGGTATTACAAGATCTGCAGGGGTCGTAACGTGTGTGGAGTGGATTCCATGGTCTCAAGCGTGGCTGCTGTGGGTACTTCGCACTCATCTTAA 1143 0.5214 MDWHSTYSPCVIPMGRHSLLALLLFSLLSAAVATAEGIDDEDDLLIRQVVPDNDNHLLNAENHFSIFKTKFGKNYATREEHDYRFGVFKANLRRARLHQKLDPSAVHGVTKFSDLSPSEFRRQYLGLRPLRLPADAHRAPILPTSDLPTDFDWRDHGAVAEVKDQGACGSCWAFSTAGALEGAHFLATGELVSLSEQQLVDCDHECDPEEAGACDAGCNGGLMNSAFEYTLKAGGLQREKDYRYTGTDRGPCKLDKSKIAASVANFSVISVDEDQIAANLIKHGPLAVGINAVFMQTYIGGVSCPYICGRHLDHGVLLVGYGSAAYAPIRFKEKPYWIIKNSWGENWGDNGYYKICRGRNVCGVDSMVSSVAAVGTSHSS 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1202 380 CDD Peptidase_C1A 148 371 IPR039417 -
Alju08g1202 380 PRINTS Papain cysteine protease (C1) family signature 336 342 IPR000668 GO:0006508|GO:0008234
Alju08g1202 380 PRINTS Papain cysteine protease (C1) family signature 314 324 IPR000668 GO:0006508|GO:0008234
Alju08g1202 380 PRINTS Papain cysteine protease (C1) family signature 165 180 IPR000668 GO:0006508|GO:0008234
Alju08g1202 380 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 60 365 IPR013128 GO:0008234
Alju08g1202 380 SUPERFAMILY Cysteine proteinases 61 371 IPR038765 -
Alju08g1202 380 Gene3D Cysteine proteinases 40 372 - -
Alju08g1202 380 Pfam Papain family cysteine protease 147 370 IPR000668 GO:0006508|GO:0008234
Alju08g1202 380 FunFam Cysteine protease RD19A 44 372 - -
Alju08g1202 380 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 165 176 IPR000169 -
Alju08g1202 380 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 312 322 IPR025660 -
Alju08g1202 380 SMART Inhibitor_I29_2 64 120 IPR013201 -
Alju08g1202 380 SMART pept_c1 147 372 IPR000668 GO:0006508|GO:0008234
Alju08g1202 380 Pfam Cathepsin propeptide inhibitor domain (I29) 64 120 IPR013201 -
Alju08g1202 380 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 336 355 IPR025661 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1202 Alju-ChrAlju08 9048374 9051927 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g1202 08 9048374 9051927 Alju08g1202 08 9048374 9051927 ECH