Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1199 ATGAGGGTCACTTCCATGTTGCTAAGTCTGGTTCTGTTTTTCACTCTTTTCTCTTTCTCTTGTTCCGCCAACACCTCTGAACTGTTTGAAAGCTGGTGCAAGCGGCATGGCAAAACCTACTCTTCCGAAGCCGAAAAACTATACAGGTTCAAAGTATTCGAGGATAACTATGCCTTTGTTTCCAACCACAATCAAATGGGCAATTCTAGCTATACGCTTTCCCTCAATGCCTTCGCTGATCTCACCAGCCATGAATTTAAGGTCTCTCGTTTAGGTTTATCCCCTGCTCTGCTTCGATTCGACCATCAAACGCTTCAGCAGCCCGATGACATTCCCCTAGAGAGTCTTCCTTCTGAGGTTGATTGGAGAAAGCAAGGGGCCGTAACTCAGGTCAAGGACCAAGGAAGTTGTGGGGCTTGTTGGTCATTCTCGGCGACAGGAGCTGTTGAAGGTATAAATAAGATTGTTACAGGCTCTCTTGTTAGCCTCTCTGAACAAGAATTGGTGGATTGTGATAGAACCTATAACAGTGGTTGTGAGGGTGGACTCATGGATTATGCTTTTCAGTTTGTCGTTGATAACAATGGGATTGACACAGAGGAAGATTACCCATACCGAGGTCGTCAAGGGTCTTGTATCAAGGATAAGTTAAATAGACGTGTTATTACCATTGATGGTTATACTGATGTGCCTCCGAATGACGAGAAGTGGCTACAAAAGGCTGTTGCAACCCAGCCTGTTAGTGTTGGCATATGTGGGAGCGATAGAGCTTTCCAGTTATACTCAAAGGGTATTTTCAGCGGCCCGTGTTCAACTTCTTTGGATCATGCGGTGCTGATTGTAGGATATGGTTCAGAAAATGGGGAGGATTACTGGATAGTGAAGAATTCATGGGGAACTAGTTGGGGAATGAATGGTTACATACACATGCGGCGAAACACCGGCAACTCCCAAGGGTTATGTGGAATCAACAGTTTAGCATCATATCCAACCAAGTCCAGCCCTAATCCTCCTCCTCCTCCATCTCCACCAGCTCCTATTAAATGTAATTTCTTTACTTATTGTGCACAAGGAGAGACCTGTTGCTGTGCAAGACACATTTTCGGTATATGTTTTTCATGGAAATGTTGTGGCTTATCATCTGCCGTCTGCTGCAAGGACAATCACCATTGCTGCCCCCATGACCATCCTGTATGTGATATCAGTAGGGGTCAATGTCTTAAGAGAAATGCAAATATGACGAGAATAAAGGCTAACGAGATCGAGGGCCCTTTCCATAGGCCGAAGGGTTGGAATTCTCAGTGA 1305 0.4506 MRVTSMLLSLVLFFTLFSFSCSANTSELFESWCKRHGKTYSSEAEKLYRFKVFEDNYAFVSNHNQMGNSSYTLSLNAFADLTSHEFKVSRLGLSPALLRFDHQTLQQPDDIPLESLPSEVDWRKQGAVTQVKDQGSCGACWSFSATGAVEGINKIVTGSLVSLSEQELVDCDRTYNSGCEGGLMDYAFQFVVDNNGIDTEEDYPYRGRQGSCIKDKLNRRVITIDGYTDVPPNDEKWLQKAVATQPVSVGICGSDRAFQLYSKGIFSGPCSTSLDHAVLIVGYGSENGEDYWIVKNSWGTSWGMNGYIHMRRNTGNSQGLCGINSLASYPTKSSPNPPPPPSPPAPIKCNFFTYCAQGETCCCARHIFGICFSWKCCGLSSAVCCKDNHHCCPHDHPVCDISRGQCLKRNANMTRIKANEIEGPFHRPKGWNSQ 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1199 434 SMART GRAN_2 349 406 IPR000118 -
Alju08g1199 434 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 274 284 IPR025660 -
Alju08g1199 434 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 25 325 IPR013128 GO:0008234
Alju08g1199 434 SMART pept_c1 116 331 IPR000668 GO:0006508|GO:0008234
Alju08g1199 434 SMART Inhibitor_I29_2 29 86 IPR013201 -
Alju08g1199 434 SUPERFAMILY Cysteine proteinases 23 331 IPR038765 -
Alju08g1199 434 CDD Peptidase_C1A 117 330 IPR039417 -
Alju08g1199 434 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 134 145 IPR000169 -
Alju08g1199 434 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Alju08g1199 434 FunFam Cysteine protease 1 346 409 - -
Alju08g1199 434 Gene3D Granulin 346 420 IPR037277 -
Alju08g1199 434 Pfam Cathepsin propeptide inhibitor domain (I29) 29 86 IPR013201 -
Alju08g1199 434 Pfam Granulin 360 407 IPR000118 -
Alju08g1199 434 Pfam Papain family cysteine protease 116 330 IPR000668 GO:0006508|GO:0008234
Alju08g1199 434 PRINTS Papain cysteine protease (C1) family signature 291 297 IPR000668 GO:0006508|GO:0008234
Alju08g1199 434 PRINTS Papain cysteine protease (C1) family signature 276 286 IPR000668 GO:0006508|GO:0008234
Alju08g1199 434 PRINTS Papain cysteine protease (C1) family signature 134 149 IPR000668 GO:0006508|GO:0008234
Alju08g1199 434 SUPERFAMILY Granulin repeat 346 379 - -
Alju08g1199 434 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 291 310 IPR025661 -
Alju08g1199 434 FunFam cysteine protease XCP2 9 333 - -
Alju08g1199 434 Gene3D Cysteine proteinases 14 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1199 Alju-ChrAlju08 9022254 9024969 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g1199 08 9022254 9024969 Alju08g1199 08 9022254 9024969 ECH