Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1044 ATGGGGCCTTGGGCTATAGCCGTCCACGGTGGCGCTGGCGTCGACCCTAATCTCCCGGCCCACCGTCAAGAACAAGCCAAGCAACTCCTCACGCGCTGTCTCCAACTAGGCATTTCTTCTCTTAATTCCAATCTTCCCGCCATTGATGTCGTTGAACTCGTCGTGAGGGAACTGGAAACAGATCCGCTGTTCAACTCAGGACGTGGATCTGCGCTGACGGAAAACGGGACAGTGGAAATGGAGGCGAGCATCATGGACGGAACAAAGAGAAGATGCGGTGCCGTGTCGGGCGTTACCACCGTCAAGAACCCGATATCGCTGGCACGCTTGGTCATGGATAAATCCCCTCATTCCTACCTCGCTTTCTCCGGCGCCGAACAATTCGCCAGGCAACAGGGTGTGGAAACAGTGGACAACGGGTACTTCATTACTCCTGAAAATGTTGGCATGCTGAAGCTGGCAAAAGAAGCGAACACTATTCTGTTTGATTACAGGATCCCAGTTGGGAACGAAACGTGCGGTGCGGGGATAGAGAGTCCACTGCAAATGAATGGACTGCCCATCAGCGTGTACGCGCCGGAGACGGTGGGGTGCGTGGTGGTGGACAGCCAGGGGCGGTGTGCGGCGGGGACGTCAACGGGAGGGTTGATGAACAAAATGACAGGAAGGATCGGGGACTCGCCGTTGATAGGTGCGGGGACGTACGCGTGTGAGGTGTGCGGGGTGTCGTGCACGGGTGAGGGGGAGGCAATCATACGGGGGACACTGGCGCGTGAGGTGGCGGCGGTGATGGAGTACAAAGGAATGAAGCTTCAGGAAGCAGTTGACTTCGTGGTAAAGGAAAGGTTGGACGAAGGAATGGCGGGTTTGATTGCTGTGTCTAATACTGGTGAAGTTGCCTATGGCTTCAATTGTAATGGCATGTTTAGAGGTTGCGCCACTCAGGACGGCTTCATGGAAGTCGGAATCTGGGAATAG 978 0.5552 MGPWAIAVHGGAGVDPNLPAHRQEQAKQLLTRCLQLGISSLNSNLPAIDVVELVVRELETDPLFNSGRGSALTENGTVEMEASIMDGTKRRCGAVSGVTTVKNPISLARLVMDKSPHSYLAFSGAEQFARQQGVETVDNGYFITPENVGMLKLAKEANTILFDYRIPVGNETCGAGIESPLQMNGLPISVYAPETVGCVVVDSQGRCAAGTSTGGLMNKMTGRIGDSPLIGAGTYACEVCGVSCTGEGEAIIRGTLAREVAAVMEYKGMKLQEAVDFVVKERLDEGMAGLIAVSNTGEVAYGFNCNGMFRGCATQDGFMEVGIWE 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1044 325 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 322 IPR029055 -
Alju08g1044 325 CDD Asparaginase_2 5 317 - -
Alju08g1044 325 FunFam Isoaspartyl peptidase/L-asparaginase 195 325 - -
Alju08g1044 325 Gene3D (Glycosyl)asparaginase 195 325 - -
Alju08g1044 325 Pfam Asparaginase 4 324 IPR000246 GO:0016787
Alju08g1044 325 PANTHER L-ASPARAGINASE 3 311 IPR000246 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1044 Alju-ChrAlju08 7861335 7862835 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1044 6 259 Miscellaneous Gene Families AT4G00590 29.603 1.60e-20 89.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g1935 07 45649767 45651314 Alju08g1044 08 7861335 7862835 CCT
Alju08g1044 08 7861335 7862835 Alju08g1044 08 7861335 7862835 ECH