Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0980 ATGAAAATGGCGTCTAAGAAAGCTACAAGTGAAGAGAGTCACGGCCAAGACTCTCCTTACTTTGTGGGATGGCAAGAGTACGAGAAGAATCCTTATCACCCCATCTCAAATCCTTCCGGAATCATTCAGATGGGACTCGCAGAGAATCAGCTCTCATTCGACATTGTTGAGGCCTGGCTGGAGAAAAATCCCCACATATTGGGTCTCAAGAAAGATGGATTATCTGTGTTTAGAGAACTTGCTCTCTTCCAGGATTATCATGGCTTGCCTTCTTTCAAACACGCACTGGTGAACTTCATGGCAAACATAAGAGGAAACAGAGTAAGCTTTAATTCAGACAGACTCGTTCTCACCGCCGGAGCTACATCTGCCAATGAGATTCTCATGTTCTGCCTTGCTGATCCCGGCGAAGCTTTCCTTCTCCCAACTCCCTACTACCCTGCATTTGACAGAGATCTCAAGTGGAGGACTGGGGTTGAAATAGTTCCCATACACTGCTCAAGCTCGGACGGTTTCAGAATAACTCCCTCTGCTCTGGAACAAGCCTATGAACAAGCCCTATCACTGAATCTAAACGTTAAAGGGGTCTTAGTGACCAACCCCTCCAATCCTCTAGGCATAAGCTTGAGCAAAACAGAACTGGACCTTCTCCTGGATTTCGCTGTTGCAAAGAAGGTTCATGTCATAAGTGACGAAATTTATTCAGGCACAGTCTTCGAATCGCCCTGTTTCATAAGCATCATGGAAGTAGCAAAGGAAAAGACCATGGACGACGCTGAATTGTGGAGCCGAATTCACGTTGTTTATAGCCTGTCAAAGGACCTTGGCTTGCCTGGATTTCGAGTAGGCATGATCTACTCAAATAACCACGTGGTGGTGGACGCAGCCACAAAAATGTCAAGCTTCGGGCTGGTTTCCTCTCAGACTCAGTATCTGCTGGCAAACTTGCTCTCCGACGATAAATTCACAGAGGAGTACATGAAGGAGACTCAGATGAGGCTGAAGAAGCGAAGGCAAATGCTGGTTTCTGGGTTGAAAAAAGCAGGGATTAGGTGTTTGAAGAGCAACGCTGGGCTGTTCTGCTGGGTGGACATGAGGCACATGTTAAGGACAGATAGTTTTGAAGCCGAGAAGGAGCTTTGGAGGAGGATTCTTACGGTGGTTGGTCTGAACATATCACCCGGTTCGTCGTGCCACTGCTCTGAACCGGGGTGGTTCAGGGTCTGCTTTGCCGACATGTCTGAGATCACATTACAAGTTGCAATGCGACGGTTGAAGGTGTTTGCTGGCTCAACCGCGTCTGAGAGGTCATCACTTCGCTGCTGGGCGGGTCCCCAGTTATCTCCACCCTGTAACTGGGAGGCTGACACTTATCTCTGA 1380 0.4812 MKMASKKATSEESHGQDSPYFVGWQEYEKNPYHPISNPSGIIQMGLAENQLSFDIVEAWLEKNPHILGLKKDGLSVFRELALFQDYHGLPSFKHALVNFMANIRGNRVSFNSDRLVLTAGATSANEILMFCLADPGEAFLLPTPYYPAFDRDLKWRTGVEIVPIHCSSSDGFRITPSALEQAYEQALSLNLNVKGVLVTNPSNPLGISLSKTELDLLLDFAVAKKVHVISDEIYSGTVFESPCFISIMEVAKEKTMDDAELWSRIHVVYSLSKDLGLPGFRVGMIYSNNHVVVDAATKMSSFGLVSSQTQYLLANLLSDDKFTEEYMKETQMRLKKRRQMLVSGLKKAGIRCLKSNAGLFCWVDMRHMLRTDSFEAEKELWRRILTVVGLNISPGSSCHCSEPGWFRVCFADMSEITLQVAMRRLKVFAGSTASERSSLRCWAGPQLSPPCNWEADTYL 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0980 459 Gene3D Aspartate Aminotransferase, domain 1 30 424 IPR015422 GO:0003824
Alju08g0980 459 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 5 426 - -
Alju08g0980 459 CDD AAT_like 78 426 - -
Alju08g0980 459 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 270 283 IPR004838 GO:0003824|GO:0009058|GO:0030170
Alju08g0980 459 Pfam Aminotransferase class I and II 42 425 IPR004839 GO:0009058|GO:0030170
Alju08g0980 459 Gene3D - 64 319 IPR015421 GO:0003824
Alju08g0980 459 SUPERFAMILY PLP-dependent transferases 13 428 IPR015424 -
Alju08g0980 459 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 44 70 - -
Alju08g0980 459 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 136 157 - -
Alju08g0980 459 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 114 134 - -
Alju08g0980 459 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 190 214 - -
Alju08g0980 459 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 226 249 - -
Alju08g0980 459 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 264 288 - -
Alju08g0980 459 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 296 319 - -
Alju08g0980 459 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 77 93 - -
Alju08g0980 459 FunFam 1-aminocyclopropane-1-carboxylate synthase 3 64 319 - -
Alju08g0980 459 FunFam 1-aminocyclopropane-1-carboxylate synthase 2 291 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0980 Alju-ChrAlju08 7444407 7447156 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g0980 08 7444407 7447156 Alju08g0980 08 7444407 7447156 ECH