Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0862 ATGTACTTGGCCGAAGGTGGAGAAGTGAGGAATATGAGGGACCAACTGTTGAACTGTAGGCGTAGTTCCGTTCAGCTGAGCCCCAAAACTGGGTTTATAATGGGAGGTGGCGCAGGAGAAGTGCTGAAACACAAGTCACTGGAGAGAGTGGTCATGTGTGATAAAGACCAGGACGTGGTAGACTTGTGCCGAACACACTTGACGGAAAATGTGAAAGCCTTTGATGTGACGCCATACACAGTGCATGTGCCATCTTTTGTTGATACCTGGGGATGGGTTATGCGCAGTGGTAGTGGTAGGACCCGTGATAAAATGAGACCTTTTCCCAAACAAGCAATCATATTAGTAGCTTTCTTTATCTTCTTCGCCCATCTTTTCCACTCAGGTTCGTCAGAAATCTCCCGCCCTAACTGCAAAGCATGGCTCGTGCAATCCATTCCCACCGATATGCCCAACCTCTCACGCGTTCCCGGCGTTCTCTCTACTGGGGATGTGCTCCGGTGGCTCGCGGCGAATTCTACTCGGCGGCTGGACATAATTGCTCAGTATTGGCAGCTGGTGGCATCTCCTCATGATTCTCGTTCTGGAGATTATGGCTACTCCGAAAGTGATGTGCGTAAATTTGGTGCCCATGAAGGTGCTGCTGTTTATAAAGCCATAGATGCTGCTGCTGATCGTAATGTTAAAATCAGGTTGCTGTCTCACTCGGGAGTATATCCAGACTTCACCACAGAACCATCTAACCTTGCTTCAGGAAGGTCAAATGTTAAGAATGTGACCTTGTTACTGGGAGATTGGTGGGGTTCGGGCATTGTTCATGCCAAAGTCTGGATATCAGATAATCGGGACGTATATATTGGATCCGCAAACAATGACTGGAAATCTCTTACTCAGGTTAAGGAAGTTGGAATCTATCTTACTGGTTGCCCAGGAATAGCTGAAAGGGTTGAAGTTTACTTTAAGAATTTATGGAGACTTGCATCTCTTAATTCTTCAGCTTACACAACAACAATATTTGATCAACAGTGGCAAGTTGAAAGAAAGGTTCCTTGCTGGTCTCATTTCATTGACCCAAAAAAGAGATGCGAGTCTCCTCTTCCTGAGTTTGTAAAGACTCCCCATGTTGCAGGATATCCTGTTCTTTCTGATCCCTATATGTTTGAAGTTTCAATTGAGACTCCTGGAAGTAACCGTTCAACGAATCTTCCCCAAGCTAGCTATCTCTCCTTTGCTCCTCCTGAGCTGTCATTTGGCAAGTATCAAGCTGATGAACAGGCTTGGGTTGATACAATTAAATCTGTTGGAATGAACGAGACAGTAAGAATCAACACCATGGACTGGTTGGGTCAGTCACAATTTACTGACCAAACTATTTACTGGTCATCCCTATCCTCTGCGATATCAGAGGCTGTGTTTTCCAAGCATGCAACAGTAAAAATATTGGTGGCATATTGGAGTCATTTCATCAATGGCACAGATGTGTACTTGAAGTCTCTCCTCTACTCCAACAATCTGTGCTCATCTTCAAAGTACAACAAGTGCTCTGGAAAAGTTGAGATCAAGTACTATATGGTTCCAGGTTTCAATACAACAGGGCCTGCCATTAAGGACGGAGCCAGTACAGGAAATACATACCCTGGTTTTACGAGGGTCAATCATGGAAAATATGCAGTTTCTGACGTACGGGCTCACATTGGAACTAGCAATCTCATATGGGACTACTTTTATACCACATCAGGAGTCAGCTTTGGAACACTCAATCCTGCCATTGTTTCACAACTTCAGCAGATTTTTGATGCTGACTGGCATTCACCTTACTCTGTCCCTGTTGAAAAACTGGAACAACGCCTTTCCTCTTCATTCTAG 1866 0.448 MYLAEGGEVRNMRDQLLNCRRSSVQLSPKTGFIMGGGAGEVLKHKSLERVVMCDKDQDVVDLCRTHLTENVKAFDVTPYTVHVPSFVDTWGWVMRSGSGRTRDKMRPFPKQAIILVAFFIFFAHLFHSGSSEISRPNCKAWLVQSIPTDMPNLSRVPGVLSTGDVLRWLAANSTRRLDIIAQYWQLVASPHDSRSGDYGYSESDVRKFGAHEGAAVYKAIDAAADRNVKIRLLSHSGVYPDFTTEPSNLASGRSNVKNVTLLLGDWWGSGIVHAKVWISDNRDVYIGSANNDWKSLTQVKEVGIYLTGCPGIAERVEVYFKNLWRLASLNSSAYTTTIFDQQWQVERKVPCWSHFIDPKKRCESPLPEFVKTPHVAGYPVLSDPYMFEVSIETPGSNRSTNLPQASYLSFAPPELSFGKYQADEQAWVDTIKSVGMNETVRINTMDWLGQSQFTDQTIYWSSLSSAISEAVFSKHATVKILVAYWSHFINGTDVYLKSLLYSNNLCSSSKYNKCSGKVEIKYYMVPGFNTTGPAIKDGASTGNTYPGFTRVNHGKYAVSDVRAHIGTSNLIWDYFYTTSGVSFGTLNPAIVSQLQQIFDADWHSPYSVPVEKLEQRLSSSF 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0862 621 Pfam Spermine/spermidine synthase domain 32 75 - -
Alju08g0862 621 CDD PLDc_vPLD3_4_5_like_1 142 309 - -
Alju08g0862 621 SUPERFAMILY Phospholipase D/nuclease 167 326 - -
Alju08g0862 621 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 268 295 IPR001736 GO:0003824
Alju08g0862 621 SUPERFAMILY Phospholipase D/nuclease 420 616 - -
Alju08g0862 621 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 548 574 IPR001736 GO:0003824
Alju08g0862 621 Gene3D Endonuclease Chain A 161 328 - -
Alju08g0862 621 Gene3D Vaccinia Virus protein VP39 22 83 IPR029063 -
Alju08g0862 621 SMART pld_4 548 574 IPR001736 GO:0003824
Alju08g0862 621 SMART pld_4 268 295 IPR001736 GO:0003824
Alju08g0862 621 Gene3D Endonuclease Chain A 406 604 - -
Alju08g0862 621 PANTHER PHOSPHOLIPASE D - RELATED 131 616 - -
Alju08g0862 621 CDD PLDc_vPLD3_4_5_like_2 407 603 - -
Alju08g0862 621 Pfam PLD-like domain 213 324 IPR025202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0862 Alju-ChrAlju08 6550987 6561252 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g0862 08 6550987 6561252 Alju08g0862 08 6550987 6561252 ECH