Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0840 ATGGGCCTTTTGAGGGAGATGATGAATGGATTGAAGAAACGGCCCCATAAGAGCGAGTTGAACACGCCCATGTTTGTACCTGGGAACGACAAGTATAAAAAGATGTTGAAGAAGAAGTTAGTAGGAGGGTTTCCCGTTTACCTTAACGTCTATGATCTCACCCCCATTAATGGCTATGCCTATTGGCTTGGCCTCGGTGTTTACCATTCTGGTGTTCAAGTTCACGGGGTTGAATATGGATTTGGAGCTCATGAACACGAGACGACCGGCATTTTTCTGGTGGAACCCACACACTGTCCTGGTTTCACTTTCAGAAAATCCATTTTCATCGGAACCACAGATCTGGGTCCTAAAGATATTTCAGCGTTTATGGACAGACTGTCTCACCGCTACTCTGGCAACACCTACCATCTCATCACTAAAAATTGCAACCACTTCTGTAATGATGTTTGTCACAGATTGACAACTAACTCAATCCCTCGTTGGGTTAATCGACTTGCTCGTCTTGGACATCTCTGCAACTGTGTACTTCCGCCCGATCTACAAGAAACAAAGATTGACAGTTCTGGAGGACGAGTCGTAGAATCCGGGAAGAATAAAACCAACAAGAAACTGAGACGCCGTGCCAACGAGTACGAGGGTCCCCAGCTAGAAATAGTAGCTTCTGATTATATAAGCATTGAGTTTTAG 690 0.4493 MGLLREMMNGLKKRPHKSELNTPMFVPGNDKYKKMLKKKLVGGFPVYLNVYDLTPINGYAYWLGLGVYHSGVQVHGVEYGFGAHEHETTGIFLVEPTHCPGFTFRKSIFIGTTDLGPKDISAFMDRLSHRYSGNTYHLITKNCNHFCNDVCHRLTTNSIPRWVNRLARLGHLCNCVLPPDLQETKIDSSGGRVVESGKNKTNKKLRRRANEYEGPQLEIVASDYISIEF 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0840 229 Gene3D PPPDE domains 42 201 IPR042266 -
Alju08g0840 229 SMART DUF862_2a 44 182 IPR008580 GO:0008233
Alju08g0840 229 Pfam PPPDE putative peptidase domain 45 177 IPR008580 GO:0008233
Alju08g0840 229 ProSiteProfiles PPPDE domain profile. 44 181 IPR008580 GO:0008233
Alju08g0840 229 PANTHER DESUMOYLATING ISOPEPTIDASE 43 201 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0840 Alju-ChrAlju08 6329790 6331014 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g2170 07 47828856 47830967 Alju08g0840 08 6329790 6331014 CCT