Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0816 ATGGGCTTCATCAGTGGCATGATCATGGGCATGGCCTTTGGCATCGCTTTGATGTTCGCTTTTTCTCGCTTCCAAAGTTACCGATCCAAACGTCGTTCCCATTTGGCGGAGGCCGTAGCAGCTTTGGCTAGGATGAAGACAATGGAAGATTCTAGAAGAATTATCCCACCAGAGTCCTGTCCTCCTTGGGTAGTCTTCACTCGCAGACAGAAGTTAAGTTCTCTACTTTTAAATTGGCTCAATACCCATCTCCAGAAAATCTGGCCTTATGTTAACGAGGCGGCATCAGAGATGATAAGAAGCAATGTGGAGCCCATTCTTGATAATTACACTCCCAAAATCTTGTCTTCAATCACATTTTCCAAGTTGACTCTTGGTACTGTGGCACCTCAATTCACAGGAGTGGCGATTGTTGAAGAAGAAAGTGGGGCTGATGGAGTGACTATGGAATTGGAGATGCAATGGGATGGTAACCCCACTATTGCATTTGATGTCAAAACTCGAGTTGGCGTTGTGATACCTGTTAAGGTAAAAGATATTGGATTCACTGGCGTTTTTAGGCTGATCTTCAAACCATTAGTAGATGAGTTCCCTTCTTTTGGAGCTGTTTGTTATTCCTTGAGAGAAAAGAAACATCTAGACTTTACTCTTATGGTTTCTGGCGGTGATATCTCAACTCTCCCAGGCGTATCTGATGCTATAGAGGAAACAATTCGAGATGCTATTGAGGATTCTATAACCTGGCCAGTTCGCAAAATTATACCAATTATACCAGGGGATTACAGCTTCCTTGAGTTAAAACCAGTTGGAACACTAGAAGTAAAACTAGTGCAAGCAAAAAACTTGGCAAATAAAGATCTGATAGGAAAATCCGATCCTTTTGCGGTTTTATTCGTACGCCCACTTCGTGACAGAGTCCAAACCAGCAAAACAATCAACAACGAGTTGAATCCATTATGGAACGAGAGCTTCGAGTTCATTGTTGAAGATGCGTCAACTCAGCACTTGACTGTAAGAATATTTGATGATGAAGGCCTTGGGGCTGATCAGCTCATTGGGTGTGCCCAGGTGCCATTAAAGGACCTTCAACCTGGAAAAGTTCAGACTTTTTGGTTGAAACTGGTCAAGGATTTGGAGGTCCAGAGAGATAAAAAATACAGGGGTGAGGTGCATTTGGAGTTATTGTACTGTCCATTCGGTGTTGAAAGCAACTTTACAAACCTGTTTAGTGGTAGCTTCGGGTTGACCACTTTCGAGAAGACTCTTAAGAGATCATCTGATCAGACACAGAGTGGTGATGTTAACAAATCACAGAAAAAATATGTGATAGTACGAGGAGTACTGTCTGTGACAATGATATCAGCTGAAGACCTACCAGATACAGACTTACTGGGCAAAATTAACGCTTATGTTGTGCTCATGTTGAAGAAAGCAGATCAAAAACTCAGGACCAGGGTTGCAACTTCAGGGCTAAACCCTGTTTGGAATCAAACATTTGACTTCGTTGTGGAGGATGCGTTGCATGAAATGTTAATTCTTGAAGTCTGGGATCAAAATCTCATCGGGCAGGACAAAATTGGGAGAGTGACGATGACACTGACTCGGGTCATCCTAGAAAAGGAAGTTCAGGATAGTTTTGCATTAGATGGAGCTAAATCTGGAAAACTAAACCTGCATCTTCGGTGGACTCCACAACACATGTATCGAGATCCCTGA 1716 0.4272 MGFISGMIMGMAFGIALMFAFSRFQSYRSKRRSHLAEAVAALARMKTMEDSRRIIPPESCPPWVVFTRRQKLSSLLLNWLNTHLQKIWPYVNEAASEMIRSNVEPILDNYTPKILSSITFSKLTLGTVAPQFTGVAIVEEESGADGVTMELEMQWDGNPTIAFDVKTRVGVVIPVKVKDIGFTGVFRLIFKPLVDEFPSFGAVCYSLREKKHLDFTLMVSGGDISTLPGVSDAIEETIRDAIEDSITWPVRKIIPIIPGDYSFLELKPVGTLEVKLVQAKNLANKDLIGKSDPFAVLFVRPLRDRVQTSKTINNELNPLWNESFEFIVEDASTQHLTVRIFDDEGLGADQLIGCAQVPLKDLQPGKVQTFWLKLVKDLEVQRDKKYRGEVHLELLYCPFGVESNFTNLFSGSFGLTTFEKTLKRSSDQTQSGDVNKSQKKYVIVRGVLSVTMISAEDLPDTDLLGKINAYVVLMLKKADQKLRTRVATSGLNPVWNQTFDFVVEDALHEMLILEVWDQNLIGQDKIGRVTMTLTRVILEKEVQDSFALDGAKSGKLNLHLRWTPQHMYRDP 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0816 571 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 73 257 IPR031468 GO:0008289
Alju08g0816 571 CDD SMP_SYT 61 256 - -
Alju08g0816 571 FunFam Plant synaptotagmin 265 407 - -
Alju08g0816 571 ProSiteProfiles C2 domain profile. 424 546 IPR000008 -
Alju08g0816 571 Pfam Synaptotagmin-like mitochondrial-lipid-binding domain 78 256 IPR039010 -
Alju08g0816 571 PANTHER EXTENDED SYNAPTOTAGMIN-RELATED 1 562 IPR045050 GO:0008289
Alju08g0816 571 CDD C2 448 544 - -
Alju08g0816 571 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 268 399 IPR035892 -
Alju08g0816 571 SMART C2_3c 447 545 IPR000008 -
Alju08g0816 571 SMART C2_3c 271 371 IPR000008 -
Alju08g0816 571 FunFam Extended synaptotagmin-2 425 566 - -
Alju08g0816 571 CDD C2 272 374 - -
Alju08g0816 571 ProSiteProfiles C2 domain profile. 251 372 IPR000008 -
Alju08g0816 571 Gene3D C2 domain 428 565 IPR035892 -
Alju08g0816 571 Gene3D C2 domain 264 398 IPR035892 -
Alju08g0816 571 Pfam C2 domain 446 544 IPR000008 -
Alju08g0816 571 Pfam C2 domain 270 374 IPR000008 -
Alju08g0816 571 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 440 566 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0816 Alju-ChrAlju08 6160868 6163918 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0816 272 563 Lipid Metabolism Gene Families AT1G51570 22.188 1.24e-08 56.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g0816 08 6160868 6163918 Alju08g0816 08 6160868 6163918 ECH