Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0814 ATGAAGCACACTGCGCCTGAGGCTGCTCCATCTTTATCTACGGCACCCTCTTCAACGACGGACCAGTCACATGTTGCCACTCCGTCGTCGTCGTCGTTGGCTTCGCCGGACAAACCTGTTTTAGGTTCGTCCGCCGCTGCTCAGGAGGACCTGGCTATAGGGTCTAGGGATGGAGGCGGCGCCCACCAGTCCGTGACCATCGAACGCCGGGGCGACTACTCGGCCGTTTGCCGATGGACGGTTCACAATTTTCCACGAATAAAAGGTAGGGCACTATGGAGCAAGTACTTTGAGGTCGGAGGTTATGATTGCCGTCTCTTGATATACCCCAAGGGTGACTCTCAGGCCTTGCCTGGCTATATCTCCATCTACCTGCAAATCATGGACCCTGGGGCCACTTCCTCGTCCAAATGGGACTGTTTTGCTAGCTACCGTTTGGCAATCGTGAATGTAGCCGACGATTCTAAGACCATTCATCGGGATTCGTGGCATCGGTTCTCAAGTAAGAAGAAATCACACGGGTGGTGTGATTTCACGCCCTCTACAACAGTATTGGATCCAAAATTGGGCTACTTATTTAATGGCGATTCGATATTGATAACCGCCGATATTCTTATTCTTAACGAGTCCATTAATTTTACCCGAGACACCAATGAGCTGCAATCATCGGCATCTTCATCTTCATCCATGATATCTTCCTCTGTTGTCGCGGGCCCTGTGTCCGACGTGTTGAGTGGAAAATTCACTTGGAAAGTACATAATTTCAGTTTATTTAAGGAGATGATAAAAACACAGAAGATAATGAGCCCCATTTTTCCAGCTGGGGAGTGTAATTTGAGGATTAGTGTCTATCAGAGCTCGGTTAATGGAGTCGAATATCTGTCAATGTGCTTGGAAAGCAAGGATACAGATAAGACAGTGATGTTGTCCGATAGGAGTTGCTGGTGTTTATTTCGAATGTCAGTCTTGAACCAGAGGCCAGGTTCGAATCACATGCACAGGGATTCGTATGGGCGGTTTGCAGCTGATAATAAAAGCGGTGATAATACAAGCTTGGGATGGAATGATTATATGAAGATGTCAGATTTTATTGGGCCTGATTCAGGGTTTCTGGTGGATGACACTGCAGTTTTTAGTACGTCATTTCATGTGATTAAAGAGTTAAGTAGCTTCTCTAAGAATGGGGCTTTAATTGCAGGAAGAATTGGGAGTGGCGCAAGGAAATCAGATGGTCATATGGGTAAGTTTACTTGGAGGATTGAAAACTTTACAAGGTTAAAGGATTTATTGAAGAAGAGAAAAATAACGGGTCTTTGCATCAAGAGCCGGAGGTTTCAAATTGGTAACCGGGATTGTCGTCTCATTGTATATCCCCGAGGGCAGTCTCAGCCTCCTTGCCACCTTTCAGTGTTTCTTGAAGTTACAGATTCAAGAAATACTTCCAGTGATTGGAGTTGCTTTGTTAGTCATCGGTTGTCAGTTGTGAACCAGAAGATGGAGGAGAAGTCTGTTAGCAAGGAATCTCAGAACCGCTACTCCAAGGCTGCAAAAGATTGGGGCTGGCGTGAATTTGTGACCCTCACTAGCCTCTTTGATCAAGATTCCGGTTTTCTTGTCCAGGATACTGTTGTATTCTCAGCAGAAGTGCTTATATTGAAAGAGACATCTATAATGCAGGATTTGATTGATTACAATTCTGAGTTGAGTAGTAGTAGTTCCTTTACTGATAGTTATGTAAAGAGAAAGACATTTACATGGAAAGTGGAGAATTTCCTGTCATTTAAGGAAATAATGGAGACTCGAAAGATCTTCAGTAAATTTTTTCAGGCTGGTGGATGTGAACTTCGGATTGGTGTGTATGAATCCTTTGACACCATATGTATTTATCTAGAGAGCGACCAGGCTGTTGGTAGTGATCCAGATAAAAACTTTTGGGTTAAATACAGGATGGCTGTTGTGAATCAAAAGAATCCAGCCAAGACAGTGTGGAAGGAATCCTCTATTTGTACGAAGACATGGAATAATTCTGTTTTGCAATTCATGAAGGTGTCTGATATATTGGAAGCAGATGCAGGGTTTCTTGTCCGTGACACTGTTGTTTTCGTATGTGAAATATTGGATTGCTGCCCTTGGTTTGATTTTTCAGACTTAGAGGTTTTAGCTTCAGATGATGATCAGGATGCTTTGACAACTGATCCTGATGAACTTGTTGACTCTGAAGACAGTGAAGGAATAAGTGGAGATGAAGAAGACATTTTTAGAAATCTTCTTTCTCGAGCTGGATTTCACCTAACATATGGAGATAATCCTTCACAGCCACAAGTTACTTTAAGGGAAAAGCTTTTAATGGATGCTGGGGCAATTGCTGGGTTTCTGACTGGACTGCGGGTATATCTCGATGATCCTGTGAAAGTAAAGCGTCTGCTTCTTCCAACCAAGCTCTCTGGTAGTTGTGAAGGAAAGAAGGTTGCTAAGGCTGATGAATCTTCCCCCAGTTTGATGAATTTGCTGATGGGAGTCAAGGTCTTACAGCAGGCAATCATTGATTTACTTTTGGATATAATGGTGGAATGCTGCCAACCTTCTGAAGGGTATTGTGCTGTTGATTTTCCTGATACATGCTCAAAAACATCTCCTGATAGCAGTGGAGCTGCTAGTCCTGTTGAATGTGATAGAGAAAACGGGGCAGCAGAATCTGCTCAATTTCCTGTTGATGAGAGATTGGATTCTGCTGATGAAGAAAGTAGTGGTACATCTGCTGTACAAAGCTCTGATTCAAACGGCAGTGTCATTCAGGAGAAAGCTCTTCCTGGACAACCTATTTTTCCACCAGAAACATCTGCTGTTGTATCAGAAAATCCATCCTTTCGATCAAAGACCAAGTGGCCAGAACAGTCGGAGGAGCTGTTAGGTTTAATTGTAAACTCACTAAGAACCCTTGATGGGGCTGTTCCACAAGGCTACCCTGAGCCACGACGGCGTCCTCAGTCTGCACGCAAAATTTCTATTGTGTTGGACAAAGCTCCTAAGCATCTGCAAGCTGACCTTGTAGTGCTGGTTCCCAAATTGGTTGAGCCTTCAGAACATCCACTAGCCGCCGGTGCACTTCTTGAGCGGCTCCAAAAGCCAGATGCAGAACCTGCCTTGCGAATGCCTGTTTTTGAGGCTCTTAGTCAACTGGATTGTGGTAGTGAAGTGTGGGAACGTGTTCTATTCCAATCAATTGAGCTTTTGGCTGACTCAAACGGTGAACCCCTTTCTGCAACTATAGATTTTATATTCAAAGCAGCAGCTCAATGTCAACATCTTCCTGAAGCAGTTAGATCTGTTCGTGTCAGACTAAAAAATCTAGGTCTTCAGGTTTCACCTTGTGTCCTTGACTTCTTGAGTAAGACTATTAATAGTTGGGGGGATGTTGCTGAAACTATACTGAGGGACATTGATTGTGATGATGACGTGGGTGACAGTTGCTCAGCGCTGCCATGTGGACTTTTCTTATTTGGTGAACATGGCACAACTACTGGGTTGAATGTGATTGATGAACAGGCTTTCCCAGCTAGTTGTTATTTTTCTGATATTTACATACTGATCGAGATGCTATCAATTCCTTGTCTTGCTGTTGAAGCTTCTCAAACCTTTGAGAGAGCTGTAGCTCGAGGTGCAATTGGTGCTCAGTCTGTAGCCTTGGTTTTGGAGAAGCGTGCCTCCCAAAGATTGACTAATAATTCCGTAAATGCAGCTGAAAGTTTTCCATGTTCAGATGTTGTTGCAGAGGGAAATGCCAATGAACCCTTTGGAGTTCAAAAGGATGATTTTACTTCAGTTCTTGGCCTTGCTGAAACATTAGCACGGTCCAGACACTCATGTGTGAAAGAATTTGTGAAGTTACTCTATTTGATATTGTTTAGATGGTATGCTGATGAATCTTATCATGGGACAATGCTCGAGAGGCTTGTTGGCCGTGCCACCAGTACCACAGATAACGGCCATGAAGTAGATTTAGATTTGGATATTTTAGTTACTTTGGCCTGTGAGGAGCAGGAAATTGCTAAACTTGTTTTGAGTATGATGCGGGAAGTTGCTGAACTCGCAAATGTTAATCGGTCTGCTCTATGGCACCAGTTATGTGCTAGCAAAGATGAAATTGTTCGTCTTCGTGAAGAAAAGGAAGCTGAAATTTCCAATAGGGCCAAGGAAAAAGCTATTTTTACACAAAAACTGAGTGAATCTGAGGCCGCAAGTATTCGTCTCAAGTCTGAGATGAGGGCCGAGATGGATCGGTTGGCTCGGGAGAAGAAGGAGCTTGCTGAACGGGTACAAGAAGTTGAAAGTCAGCTTGAGTGGCTTCGTTCAGAACGGGATGATGAAATAGCAAAGCTCTCTGCAGAGAAGAAAGCTCTTCAGGACCGTGTGCATGATGCAGAGGCACAACTCTCACTATTGAAGTCCCGGAAACGCGACGAATTGAAGAAAGTAGTCAAGGAAAAAAATGCACTTGCTGAAAGATTGAAGAGCACTGAAGCTGCACGGAAGAGATTTGATGAAGAACTGAAAAGATATGCAACAGAAAATGTCACTCGGGAAGAAGTACGAAAGTCGCTTGAGGACGAAGTTCGTAGATTGACGCAAACAGTTGGGCAAACTGAGGAAGAAAAGAGAGAGAAGGAAGAGCAGGTTGCTAGGTGTGAAGCATATATTGATGGCATGGAATCAAAATTGCAGGCCTGCCAGCAATATATTCACACACTGGAAGCTTCACTTCAGGAGGAAATGTCACGGCATGCTCCTCTATACGGTGCTGGTCTGGAGGCTCTTTCAATGAAAGAGTTGGAAACACTGGCACGCATCCACGAGGAAGGGCTAAGGCAGATCCATGCCCTTCAACAGCGCAAGGGCAGTCAAGCTGGTAGTCCTCTTGTGAGTCCACATGCCCTTCCTTCTCACATTCATGGATTATATCCCTCTGCCTCCCCTCCATTGCCTGTGGGGCTCCCTCCATCACTCATTCCAACTGGGGTCCACAGCAATGGCCACGTCAATGGAGCTGTGGGGCCCTGGTTTAAACACACTTGA 5073 0.4443 MKHTAPEAAPSLSTAPSSTTDQSHVATPSSSSLASPDKPVLGSSAAAQEDLAIGSRDGGGAHQSVTIERRGDYSAVCRWTVHNFPRIKGRALWSKYFEVGGYDCRLLIYPKGDSQALPGYISIYLQIMDPGATSSSKWDCFASYRLAIVNVADDSKTIHRDSWHRFSSKKKSHGWCDFTPSTTVLDPKLGYLFNGDSILITADILILNESINFTRDTNELQSSASSSSSMISSSVVAGPVSDVLSGKFTWKVHNFSLFKEMIKTQKIMSPIFPAGECNLRISVYQSSVNGVEYLSMCLESKDTDKTVMLSDRSCWCLFRMSVLNQRPGSNHMHRDSYGRFAADNKSGDNTSLGWNDYMKMSDFIGPDSGFLVDDTAVFSTSFHVIKELSSFSKNGALIAGRIGSGARKSDGHMGKFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSQPPCHLSVFLEVTDSRNTSSDWSCFVSHRLSVVNQKMEEKSVSKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVVFSAEVLILKETSIMQDLIDYNSELSSSSSFTDSYVKRKTFTWKVENFLSFKEIMETRKIFSKFFQAGGCELRIGVYESFDTICIYLESDQAVGSDPDKNFWVKYRMAVVNQKNPAKTVWKESSICTKTWNNSVLQFMKVSDILEADAGFLVRDTVVFVCEILDCCPWFDFSDLEVLASDDDQDALTTDPDELVDSEDSEGISGDEEDIFRNLLSRAGFHLTYGDNPSQPQVTLREKLLMDAGAIAGFLTGLRVYLDDPVKVKRLLLPTKLSGSCEGKKVAKADESSPSLMNLLMGVKVLQQAIIDLLLDIMVECCQPSEGYCAVDFPDTCSKTSPDSSGAASPVECDRENGAAESAQFPVDERLDSADEESSGTSAVQSSDSNGSVIQEKALPGQPIFPPETSAVVSENPSFRSKTKWPEQSEELLGLIVNSLRTLDGAVPQGYPEPRRRPQSARKISIVLDKAPKHLQADLVVLVPKLVEPSEHPLAAGALLERLQKPDAEPALRMPVFEALSQLDCGSEVWERVLFQSIELLADSNGEPLSATIDFIFKAAAQCQHLPEAVRSVRVRLKNLGLQVSPCVLDFLSKTINSWGDVAETILRDIDCDDDVGDSCSALPCGLFLFGEHGTTTGLNVIDEQAFPASCYFSDIYILIEMLSIPCLAVEASQTFERAVARGAIGAQSVALVLEKRASQRLTNNSVNAAESFPCSDVVAEGNANEPFGVQKDDFTSVLGLAETLARSRHSCVKEFVKLLYLILFRWYADESYHGTMLERLVGRATSTTDNGHEVDLDLDILVTLACEEQEIAKLVLSMMREVAELANVNRSALWHQLCASKDEIVRLREEKEAEISNRAKEKAIFTQKLSESEAASIRLKSEMRAEMDRLAREKKELAERVQEVESQLEWLRSERDDEIAKLSAEKKALQDRVHDAEAQLSLLKSRKRDELKKVVKEKNALAERLKSTEAARKRFDEELKRYATENVTREEVRKSLEDEVRRLTQTVGQTEEEKREKEEQVARCEAYIDGMESKLQACQQYIHTLEASLQEEMSRHAPLYGAGLEALSMKELETLARIHEEGLRQIHALQQRKGSQAGSPLVSPHALPSHIHGLYPSASPPLPVGLPPSLIPTGVHSNGHVNGAVGPWFKHT 1690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0814 1690 SUPERFAMILY TRAF domain-like 582 706 - -
Alju08g0814 1690 CDD MATH 414 549 IPR002083 GO:0005515
Alju08g0814 1690 ProSiteProfiles MATH/TRAF domain profile. 245 382 IPR002083 GO:0005515
Alju08g0814 1690 MobiDBLite consensus disorder prediction 914 933 - -
Alju08g0814 1690 SUPERFAMILY TRAF domain-like 74 211 - -
Alju08g0814 1690 Coils Coil 1418 1523 - -
Alju08g0814 1690 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 244 395 IPR008974 GO:0005515
Alju08g0814 1690 MobiDBLite consensus disorder prediction 946 960 - -
Alju08g0814 1690 SMART math_3 418 530 IPR002083 GO:0005515
Alju08g0814 1690 SMART math_3 586 686 IPR002083 GO:0005515
Alju08g0814 1690 SMART math_3 250 363 IPR002083 GO:0005515
Alju08g0814 1690 SMART math_3 76 184 IPR002083 GO:0005515
Alju08g0814 1690 ProSiteProfiles MATH/TRAF domain profile. 413 549 IPR002083 GO:0005515
Alju08g0814 1690 PANTHER TRAF-LIKE FAMILY PROTEIN 34 1690 - -
Alju08g0814 1690 ProSiteProfiles MATH/TRAF domain profile. 74 204 IPR002083 GO:0005515
Alju08g0814 1690 ProSiteProfiles MATH/TRAF domain profile. 581 705 IPR002083 GO:0005515
Alju08g0814 1690 CDD MATH 78 204 IPR002083 GO:0005515
Alju08g0814 1690 MobiDBLite consensus disorder prediction 1 41 - -
Alju08g0814 1690 SUPERFAMILY TRAF domain-like 414 555 - -
Alju08g0814 1690 Coils Coil 1531 1565 - -
Alju08g0814 1690 SUPERFAMILY TRAF domain-like 243 388 - -
Alju08g0814 1690 MobiDBLite consensus disorder prediction 10 38 - -
Alju08g0814 1690 CDD MATH 246 378 IPR002083 GO:0005515
Alju08g0814 1690 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 405 558 IPR008974 GO:0005515
Alju08g0814 1690 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 61 210 IPR008974 GO:0005515
Alju08g0814 1690 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 568 707 IPR008974 GO:0005515
Alju08g0814 1690 MobiDBLite consensus disorder prediction 876 962 - -
Alju08g0814 1690 Pfam MATH domain 445 551 IPR002083 GO:0005515
Alju08g0814 1690 Pfam MATH domain 82 206 IPR002083 GO:0005515
Alju08g0814 1690 Pfam MATH domain 594 701 IPR002083 GO:0005515
Alju08g0814 1690 CDD MATH 583 705 IPR002083 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0814 Alju-ChrAlju08 6138620 6146685 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g0814 08 6138620 6146685 Alju08g0814 08 6138620 6146685 ECH