LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju08g0803	ATGGTGTTCATGAAGAACTTGCAGACTCTGGAAAGCATGGTGTTGTTTCAAATGAAGCTGACCCCAATGCGGCTGAACTTACAGGAACTGTTGCCCAAAATGGAATCAAATGACAGCACAGTCAGCAACAATGTGGCAATTACTAAGCAAGAGGAGGTGAAAAATACAGAGCAATTAAGAACATCGAAGGGTCCTGTCAAGACCAAGGCTGTGAAGTTGGCTGATCCCAAAGGTGTTCATCTAAGTGGGGTGAAGAAAACTAAGGATAAAAAGGACGAAGAGGCTCAACCCTCTGTGTTAAATGGCTCTTTGACTTTGAACTCTCGGCAGCCTGTTAAAAGCAAATCATTCAATGATCGCAAGACTCAAATTTCCAAGCACTCTGAGAAGTCTGATGCAGCATCCTCTGATTCACCCATAGAGAATAAAAAACCAAAAGCATTGAAGAAAGGAACTCTTGATAAAGTTCAAGGAGAAGCACAATCTTCTTCAAATATCACTGCAGAAGATGCTAAACCTCCCAAGGTGGGGATGCTTCCAAATTATGGATTTAGTTTCAAATGTGATGAACGGGCTGAGAGAAGAAAAGAGTTCTACTCTAAGCTTGAGGAAAAGATTCATGCAAAGGAAGTGGAGAAGAGTAACTTGCAAGAAAAAACCAAGGAGACCCAAGAAGCTGAAATTAAGATGCTCAGGAAGAGTCTAGGATTTAAAGCGACTCCAATGCCGAGCTTTTACCAGGAGCCTCCTTCAAAGGTGGAGTTAAAGAAGATACCAACTACAAGAGCAAAATCTCCTAAGCTTGGACGAAGGAAGAATTCAACAGGCTCAGAGTTAGATGGAAGTCCTAGCAGCAGCGCTCCTCCATTGGGTCGTCTAAGTCTGGATGACAAAGTGTCTAAGAGTAACCCCATCAAGAAAATTACTCCTCCCCAGGCAAAGAAGCCGCAACGGAAATCTCTTCCTTCAAAACTGCCTTCTGAGAAGACCAGTTCATCTAAGGCACCGAACAACGAAAAGACCACATCATCAGGTAAAACAAATAAAGATACAACCTTGTCCAACACACGTGAGAAAGAGAAATGTCAAATGGATGCAGCCAATGAAGAGAATGGTGCCTCGTCATGTAATACAAGTGAAGGTCCTTCGCTGAATATAGATCAAAATGCGGATCTCTTAGACAAGCCAACTGAAACAGAGCCTCAAGTGAATGGTGACATTGTGGTTGAAGAACAACCTCAGCTCACATTGGTGGAGGAACCAGTCGCGACAGAGCATTAA	1281	0.4301	MVFMKNLQTLESMVLFQMKLTPMRLNLQELLPKMESNDSTVSNNVAITKQEEVKNTEQLRTSKGPVKTKAVKLADPKGVHLSGVKKTKDKKDEEAQPSVLNGSLTLNSRQPVKSKSFNDRKTQISKHSEKSDAASSDSPIENKKPKALKKGTLDKVQGEAQSSSNITAEDAKPPKVGMLPNYGFSFKCDERAERRKEFYSKLEEKIHAKEVEKSNLQEKTKETQEAEIKMLRKSLGFKATPMPSFYQEPPSKVELKKIPTTRAKSPKLGRRKNSTGSELDGSPSSSAPPLGRLSLDDKVSKSNPIKKITPPQAKKPQRKSLPSKLPSEKTSSSKAPNNEKTTSSGKTNKDTTLSNTREKEKCQMDAANEENGASSCNTSEGPSLNIDQNADLLDKPTETEPQVNGDIVVEEQPQLTLVEEPVATEH	426

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju08g0803	426	MobiDBLite	consensus disorder prediction	237	389	-	-
	Alju08g0803	426	Pfam	Targeting protein for Xklp2 (TPX2) domain	184	253	IPR027329	-
	Alju08g0803	426	MobiDBLite	consensus disorder prediction	270	289	-	-
	Alju08g0803	426	MobiDBLite	consensus disorder prediction	323	351	-	-
	Alju08g0803	426	Coils	Coil	199	229	-	-
	Alju08g0803	426	PANTHER	PROTEIN WVD2-LIKE 4	45	404	IPR044833	GO:0008017
	Alju08g0803	426	MobiDBLite	consensus disorder prediction	352	366	-	-
	Alju08g0803	426	MobiDBLite	consensus disorder prediction	98	113	-	-
	Alju08g0803	426	MobiDBLite	consensus disorder prediction	114	153	-	-
	Alju08g0803	426	MobiDBLite	consensus disorder prediction	79	96	-	-
	Alju08g0803	426	MobiDBLite	consensus disorder prediction	52	183	-	-
	Alju08g0803	426	MobiDBLite	consensus disorder prediction	368	389	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju08g0803	Alju-ChrAlju08	6037789	6041039	Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Alju07g2221	07	48230172	48233314	Alju08g0803	08	6037789	6041039	CCT
	Alju08g0803	08	6037789	6041039	Alju08g0803	08	6037789	6041039	ECH