Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0706 ATGCTATAACCCAGTGTTTTCCCTTTGGATTCGTTTCTCGGCATCTTGAACATCTACTCTTCTGGATCGATCTCCGTGGTGGTGTTAGGTCAAAGAGTATCGAAACATTTTGCCTCTTTTCGGATCACCATGGATCGTAACACCGATATCAGCGCTCCTCATTCCATGGGAACCACCATTATCGGCGTCACTTACAACGGCGGTGTCGTTCTCGGAGCTGACTCTCGAACCAGCACCGGAGTATATGTTGCAAACCGGGCATCAGACAAAATTACGCAGTTAACTGATAATGTCTATGTTTGTCGCTCTGGATCGGCTGCTGATTCTCAGATTGTCTCTGATTATGTGCGCTACTTCCTTCACCAGCACACAATACAGCTGGGACAACCTGCAACAGTCAAAGTTGCCGCAAACCTTGTCAGACTTCTCTCCTATAACAACAAGAATTTCTTAGAGACTGGTTTAATTGTTGGTGGATGGGACAAATATGAAGGTGGTCAAATCTATGGTGTTCCTCTTGGTGGAACTATAGTTCAACAACCTTTTGCAATTGGAGGATCTGGCTCCAGTTACTTGTATGGATTCTTTGACCAAGCATGGAAAGAAGGAATGACCAAAGATGAAGCTGAGGACTTGGTTAAAAAGGCGGTTTCACTTGCCATTGCACGTGATGGTGCTAGTGGGGGTGTTGTCCGAACAGTTACTATAAATTCAGAGGGAGTCACTAGGAAGTTCTATCCTGGGGACCAACTTCCTCTGTGGCATGAGGAGCTGGAGTCGCACAACTCGCTGCTGGACATCCTTGGTACCCCTGAGCCGATGAGTATCTGA 831 0.4657 MLXPSVFPLDSFLGILNIYSSGSISVVVLGQRVSKHFASFRITMDRNTDISAPHSMGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYVCRSGSAADSQIVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLETGLIVGGWDKYEGGQIYGVPLGGTIVQQPFAIGGSGSSYLYGFFDQAWKEGMTKDEAEDLVKKAVSLAIARDGASGGVVRTVTINSEGVTRKFYPGDQLPLWHEELESHNSLLDILGTPEPMSI 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0706 276 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 58 257 IPR029055 -
Alju08g0706 276 FunFam Proteasome subunit beta 58 257 - -
Alju08g0706 276 ProSiteProfiles Proteasome beta-type subunit profile. 57 236 IPR023333 -
Alju08g0706 276 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 42 254 IPR029055 -
Alju08g0706 276 PANTHER METALLOPROTEASE TLDD 45 252 IPR023333 -
Alju08g0706 276 ProSitePatterns Proteasome beta-type subunits signature. 61 108 IPR016050 GO:0005839|GO:0051603
Alju08g0706 276 PRINTS Proteasome component signature 222 233 IPR000243 GO:0004298|GO:0005839|GO:0051603
Alju08g0706 276 PRINTS Proteasome component signature 65 80 IPR000243 GO:0004298|GO:0005839|GO:0051603
Alju08g0706 276 PRINTS Proteasome component signature 186 197 IPR000243 GO:0004298|GO:0005839|GO:0051603
Alju08g0706 276 PRINTS Proteasome component signature 197 208 IPR000243 GO:0004298|GO:0005839|GO:0051603
Alju08g0706 276 Pfam Proteasome subunit 56 236 IPR001353 GO:0005839|GO:0051603
Alju08g0706 276 CDD proteasome_beta_type_6 58 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0706 Alju-ChrAlju08 5262757 5268671 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g0706 08 5262757 5268671 Alju08g0706 08 5262757 5268671 ECH