Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0647 ATGGATGGTCAACTCGGTGTTACCGAAGAGGACTCCCGTGACTCTAGTGGAGATAAGTCTCTAGTTCCCTGCCTATTAAAGAAGTTTCTTGAGCCTGATTCTTCAACAGACACGCCAGAAGAAGAAAGTAAGGCATCACTAAAGATATGTTCTGTCAAAGCAGGAGGAATGATGTCTCTGGCTATTGATAGCCTAGGGGCCCTATGGATGTGGGGAAACTGCCCACAGAAAAGCAAAGAAGGAGGGTTCTCTCTTGTGAGCAGTTTCATTCCCACACCGGTATGGGATTTTCACGGCCATACTGTTGTCAAGATTGCATGTGGAAACGAGCATGCTGTGGCTCTAGTTACTGCAGGAGAATCATACGTAGGCGAAGACCTCGAGTGCTACTCTTGGGGTAATAACAGCCATGGTCAATTAGGCTCGGGGGATAGAGAAAGCAGGCCAAATCCAGAAGTTGTAAAAGCATTTGACCAGGAGTCCCCATGGTCAATTTATGAGGTAGCTTGTGGTGCCTTTCACACTGCTTTGCTCACTCACAAAAAGAGCCCCAATGACACATCAGCAAGCATGTGCTGGACGTTTGGCCTTGGGGATAATGGGCAACTTGGGCATGGAACCACACAAAGCGAATTGCTTCCTATGCCTGTCAAAGAATTGCCACAGCATGTACATCTAATTTCTGTTGACTGTGGCTTGTTTCATACCAGTGTTGTTTCATCAGCTGGTGATGTGTGGTCATGGGGAATGGAGAAGGGCCTTGGTTTGTGTCCTGATGCTAGTTTTGCTGGAACTGATTCTGGGGACGCGCTATCTCCCCTTCTTATCTCATGCACGCCATATCAGCCGAGGTTTCCAGAGCCGATCCAAGTTGCTTGTGGAGCTGCGCATACTGTTGTTGTTGCAGAGGAGGGGTATAAGATTTGGTCTTGGGGTAGGGGAAGGAGTGGGGTTCTGGGAAATGGTAAGGCAGTGGATTTTTACACTCCCATACTAGTGTTATGGCCTCCTCTGATAGAGGATTTCAAGCAAGAGGAGCAGAAGAGTAGTGGAGAAAAAGAGACTGAAGCAGTCACAGAAATTGATGAGAAATTAGCGTCAGCATTGAATGAACTGAAGCTGCTTCAGACAAGGTTTTCTGTAATGGAAAGATATGCAAGTATACTTCATGGTTCAATATTTGGAAAACCTTTTGATGAGAGTGATATCCCAGTGTCATTGAAGAACTCGGGTGTATTCGACATTGCAAAGGAATGGGAGAGCATGTTAGAGGAAGCAGATCGTAGTAAGCTAATTAGATTGGAAATGTTTTACAGAAACATGATTGCTGGTGTGAAAGATAAACTAATGAAGAGAAGGATCAAGGAGATTATAAAGGAATGCCTCCCGGCTTCAGAATTTGCAAAACAGAACACGTAG 1419 0.4553 MDGQLGVTEEDSRDSSGDKSLVPCLLKKFLEPDSSTDTPEEESKASLKICSVKAGGMMSLAIDSLGALWMWGNCPQKSKEGGFSLVSSFIPTPVWDFHGHTVVKIACGNEHAVALVTAGESYVGEDLECYSWGNNSHGQLGSGDRESRPNPEVVKAFDQESPWSIYEVACGAFHTALLTHKKSPNDTSASMCWTFGLGDNGQLGHGTTQSELLPMPVKELPQHVHLISVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPDASFAGTDSGDALSPLLISCTPYQPRFPEPIQVACGAAHTVVVAEEGYKIWSWGRGRSGVLGNGKAVDFYTPILVLWPPLIEDFKQEEQKSSGEKETEAVTEIDEKLASALNELKLLQTRFSVMERYASILHGSIFGKPFDESDIPVSLKNSGVFDIAKEWESMLEEADRSKLIRLEMFYRNMIAGVKDKLMKRRIKEIIKECLPASEFAKQNT 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0647 472 MobiDBLite consensus disorder prediction 1 20 - -
Alju08g0647 472 MobiDBLite consensus disorder prediction 1 17 - -
Alju08g0647 472 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 66 118 IPR000408 -
Alju08g0647 472 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 190 242 IPR000408 -
Alju08g0647 472 Pfam Regulator of chromosome condensation (RCC1) repeat 129 178 IPR000408 -
Alju08g0647 472 Pfam Regulator of chromosome condensation (RCC1) repeat 243 301 IPR000408 -
Alju08g0647 472 Pfam Regulator of chromosome condensation (RCC1) repeat 193 238 IPR000408 -
Alju08g0647 472 Coils Coil 358 378 - -
Alju08g0647 472 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 33 359 - -
Alju08g0647 472 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 105 115 IPR000408 -
Alju08g0647 472 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 168 178 IPR000408 -
Alju08g0647 472 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 243 304 IPR000408 -
Alju08g0647 472 SUPERFAMILY RCC1/BLIP-II 44 337 IPR009091 -
Alju08g0647 472 Gene3D - 1 361 IPR009091 -
Alju08g0647 472 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 127 181 IPR000408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0647 Alju-ChrAlju08 4771391 4772903 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g0647 08 4771391 4772903 Alju08g0647 08 4771391 4772903 ECH