Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0645 ATGGATTCTGTCTCCCCCGATGCTGGCTTCTCCGGTCGGATCCTCCGCGCTCTCCGCCACCCTCTCCTCCTCCTCCATCGCTCCCACTCCTCCTTCTTCATATTGGGCGCCACCGCCAATGTCTACACCGTCACCCTCTCCTCCCTCCCCTCCTGCACCTGCCCCGACCGCAGCACCCCTTGCAAGCACATCCTCTTCGTCCTCATTCGTGTTCTCGGCCTCCCCCTCGATCACTTCTGCCTTCGCCGCCGAACCATCCGCCCCTCCCAACTCCGCCGCCTCCTCGAACTCCCCACCTCGCCGGACGCCCTCGCCGGCTCCGCTCTTCGCGAGAGGTTTCACCAGCTTTTCTTCGCCGAAAGGCAGGAACCCAGTATAGAGGTGGAGGATGGCACCTCGTGTCCCATTTGTATGGAAGAAATGGGGAAAGAAGACAAGGTCATCGCCTGTGGAACTTGTCGGAATCCAATTCATGAAGAGTGTCTGATGAGGTGGAAGAGAAGCAGGGGAAGGAGAATGACTAGTTGTGTGATTTGTAGGGCTAGATGGAGGGGCATGAATGATCAAGATCAGTATCTAAATCTCTCTGCTTACATTAGTCAGGTCGATATTGCCGAGAGCAGTAGTGCTGGTCCCTGCGCCGGTTAA 648 0.5741 MDSVSPDAGFSGRILRALRHPLLLLHRSHSSFFILGATANVYTVTLSSLPSCTCPDRSTPCKHILFVLIRVLGLPLDHFCLRRRTIRPSQLRRLLELPTSPDALAGSALRERFHQLFFAERQEPSIEVEDGTSCPICMEEMGKEDKVIACGTCRNPIHEECLMRWKRSRGRRMTSCVICRARWRGMNDQDQYLNLSAYISQVDIAESSSAGPCAG 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0645 215 Pfam Ring finger domain 133 180 IPR001841 -
Alju08g0645 215 ProSiteProfiles Zinc finger RING-CH-type profile. 126 186 IPR011016 GO:0008270
Alju08g0645 215 SUPERFAMILY RING/U-box 125 184 - -
Alju08g0645 215 ProSiteProfiles Zinc finger SWIM-type profile. 42 72 IPR007527 GO:0008270
Alju08g0645 215 Pfam SWIM zinc finger 42 70 IPR007527 GO:0008270
Alju08g0645 215 PANTHER RING FINGER AND SWIM DOMAIN-CONTAINING PROTEIN 2 10 186 IPR039903 GO:0061630
Alju08g0645 215 ProSiteProfiles Zinc finger RING-type profile. 134 180 IPR001841 -
Alju08g0645 215 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 120 197 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0645 Alju-ChrAlju08 4768153 4768800 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g0645 08 4768153 4768800 Alju08g0645 08 4768153 4768800 ECH