Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0600 ATGGCGTCGTTCCGACGGACTTTATCGCCGGCGCACCCCGATCGGCAGTACCAAAATGGTGTTGGCTCGTTTTCAGTTTCCTCTTCTCATCACAAGTTTGCTTATAGTGCCAAGTATGCTTCTACATTTCCGGTGTTGTTTGGGTATGTAGCCGGATTGCGGAGGTTTCTTGCCGGGTTTGTTATGCGGCGGCATGCTCGGAAAGGGCAATGGAGAAGAGCATTGTTTAGCTGTTTAATCTTTTTCTTCTTAGGTTTCTTGTGGGGTATGTTTCCTATCGGTCACGTTGTCGACGACATTCGCCGTCAGGATGTCTCATTTGAGATCAAGCCGCCTCCCGCAAATGCAGAATCAGTCCCTGAGGATCGTGCCTTGAAGCGTGATGAGACTTTGGTGGTTAATCCAGTGAGTTTGAGCGTCGATAAGCATAATGCTGCCGATGATACGCTCGATTTTGTGCCGAGGAAGCAATTGATTGTGGTGACTCCCACATATAATCGGGCGCTTCAGGCCTATTTTTTAAACAGGCTGGGTCAAGTGCTCAGGCTCGTACCTCCGCCAGTTCTGTGGATTGTAGTGGAAATGAATTCAGCTTCTATGGAAACTGCTGAAATACTGAGGAAAACCGCCGTGATGTATAGGCATTTGGTCTGCACTAAGAACTCCACAAATGTGAAGGACAGAGGAGTTCATCAAAGGAATACGGCGTTGGAGCACATTGAGCGCCATAGACTAGATGGGATTATCTACTTCGCAGATGACGATAATATATATTCTCTCGAGCTGTTTGAGACCTTAAGAGACATAAGACGCTTCGGTACTTGGCCTGTTGCCATGCTTGCACAAAGCAAAAACAAGGCCATCTTGGAGGGTCCGGTATGCAATGCAAGTCAAGTGATTGGTTGGCATACAAATGAGAAGAGTAAAAGAGTTCGTAGATTTCATGTTGATATGTCAGGATTTGCTTTTAACAGCACAATCTTGTGGGATTCTAAAAGGTGGAAGCGTCCTATGTCAAATCCTATTCGCCAACTAGACACAGTGAAGGAGGGTTTTCAAGAGACCACCTTTATAGAACAATTGGTGGAAGATGAGAGTCAAATGGAAGGTTCGCCAACTGGTTGTTCCAAAATAATGAATTGGCATCTCCATTTGGATGCCCGCAATACAGATTATCCCAAGGGTTGGCTGCTACAGAAAAACCTAGATGCTGTCATCTCTGTCAAGTAA 1230 0.4585 MASFRRTLSPAHPDRQYQNGVGSFSVSSSHHKFAYSAKYASTFPVLFGYVAGLRRFLAGFVMRRHARKGQWRRALFSCLIFFFLGFLWGMFPIGHVVDDIRRQDVSFEIKPPPANAESVPEDRALKRDETLVVNPVSLSVDKHNAADDTLDFVPRKQLIVVTPTYNRALQAYFLNRLGQVLRLVPPPVLWIVVEMNSASMETAEILRKTAVMYRHLVCTKNSTNVKDRGVHQRNTALEHIERHRLDGIIYFADDDNIYSLELFETLRDIRRFGTWPVAMLAQSKNKAILEGPVCNASQVIGWHTNEKSKRVRRFHVDMSGFAFNSTILWDSKRWKRPMSNPIRQLDTVKEGFQETTFIEQLVEDESQMEGSPTGCSKIMNWHLHLDARNTDYPKGWLLQKNLDAVISVK 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0600 409 CDD GlcAT-I 158 387 IPR005027 GO:0015018|GO:0016020
Alju08g0600 409 FunFam Glycosyltransferases 157 399 - -
Alju08g0600 409 SUPERFAMILY Nucleotide-diphospho-sugar transferases 157 402 IPR029044 -
Alju08g0600 409 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 70 403 IPR005027 GO:0015018|GO:0016020
Alju08g0600 409 Pfam Glycosyltransferase family 43 177 385 IPR005027 GO:0015018|GO:0016020
Alju08g0600 409 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 156 402 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0600 Alju-ChrAlju08 4415237 4417515 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0600 1 409 Glycosyltransferase AT1G27600 62.379 0.0 509
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g0600 08 4415237 4417515 Alju08g0600 08 4415237 4417515 ECH