Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0546 ATGCATGCGACACTGCACACTTCCATAACCATGGACCTCAAGATCTTCACTTCCTTCCTTCTTCTTTTCTCTGCAATAATTCACATCCTCGCCATAACCACCACCGCTTCAGACCTCTGTGCCTCTGAACCCTTCCACTTCGACGTCACCCTCATTCCCATTTACTCTAAATGCTCCCCTGTCAAACTACCCAACACTACTGACTCATTATTTGACACCGTCATGGTCATGGCCTCTACAGATTCACCACGACTCACCTACTTATCTTCCCTTCTCGCCAAGAAGCGATCAACCTCTGCCCCTGTTGCCTCCGGCCAGGCTCTCAATATCGGAAACTACGTCGTCCGGGCCAAGCTCGGCACTCCCGGTCAGCTCATGTTCATGGTCTTAGACACGAGCAGCGATGAGGCCTGGGTCCCATGTACCGGTTGTACCGGTTGCTCCGCCGTCACTTTTTCACCCAAAGCTTCTACTACTTTTAGGTCATTGGATTGCTCTGTTCCGCAATGCAGTCAGGTCCGTGGATCCTCTTGCCCCGGAAAAAGATCCGATCCGTGTTCATTTAACCATTCGTACGCTGGTTCATCCTTCTCCGCCACGCTTGTCCAAGATTCTCTCAGACTAGCATCTGACGTGATCCCCAATTACGCTTTCGGCTGCGTCAATAACGTCAACGGCGGTCCAATTCCCTCCCAAGGACTACTGGGTCTGGGTCGGGGATCCGTGTCCTTGTTTTCTCAAGTCGGGTCACTTTACAGAGGAGTTTTCTCCTACTGCCTTCCCAGTTTTAGGTCATATTTCTTCTCTGGGTCGCTGAAACTCGGGCCCAAAGGTCAGCCCAAAAGCATCCGTACCACCGCACTATTACGTAATCCCCGCCGGCCGTCTCTGTACTACGTGAACTTGACCGGAGTCAGCGTGGGTCGGGTCCTTGTCCGGTTACCTAGTGAGCTTCTGAGCTTCAACCCTTACACCGGGGCTGGAACCATCATAGATTCGGGTACGGTGATTACCCGATTCGTGGGACCAGTGTATAATGCAATCAGGGACGAGTTCAGAAAACAAGTGAGAGGTCCTTTTAGGAGCTTGGGGGCGTTTGACACTTGCTTTGAGAAGACTTATGAGACATTGGCACCCATTATTACATTTCACTTCTCGGGGTTGGATCTGGTATTGCCATTGGAGAACAGCTTCATACATAGCAGTTCGGGTTCACTGGCCTGCTTGGCAATGGCGGCGTCACCCAATAATGTGAACTCGGTGTTGAATGTGATAGCCAATTTGCAGCAGCAGAACCTTAGGATTTTGTTTGATACTGTCAATAATAAGGTTGGCATAGCTCGTGAGCTCTGTAACTAG 1359 0.507 MHATLHTSITMDLKIFTSFLLLFSAIIHILAITTTASDLCASEPFHFDVTLIPIYSKCSPVKLPNTTDSLFDTVMVMASTDSPRLTYLSSLLAKKRSTSAPVASGQALNIGNYVVRAKLGTPGQLMFMVLDTSSDEAWVPCTGCTGCSAVTFSPKASTTFRSLDCSVPQCSQVRGSSCPGKRSDPCSFNHSYAGSSFSATLVQDSLRLASDVIPNYAFGCVNNVNGGPIPSQGLLGLGRGSVSLFSQVGSLYRGVFSYCLPSFRSYFFSGSLKLGPKGQPKSIRTTALLRNPRRPSLYYVNLTGVSVGRVLVRLPSELLSFNPYTGAGTIIDSGTVITRFVGPVYNAIRDEFRKQVRGPFRSLGAFDTCFEKTYETLAPIITFHFSGLDLVLPLENSFIHSSSGSLACLAMAASPNNVNSVLNVIANLQQQNLRILFDTVNNKVGIARELCN 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0546 452 Gene3D Acid Proteases 275 452 IPR021109 -
Alju08g0546 452 FunFam aspartyl protease AED3 92 275 - -
Alju08g0546 452 FunFam Aspartyl protease AED3 276 452 - -
Alju08g0546 452 ProSiteProfiles Peptidase family A1 domain profile. 113 447 IPR033121 -
Alju08g0546 452 SUPERFAMILY Acid proteases 107 451 IPR021109 -
Alju08g0546 452 PANTHER ASPARTYL PROTEASES 35 445 IPR001461 GO:0004190|GO:0006508
Alju08g0546 452 Gene3D Acid Proteases 89 274 IPR021109 -
Alju08g0546 452 Pfam Xylanase inhibitor C-terminal 298 447 IPR032799 -
Alju08g0546 452 Pfam Xylanase inhibitor N-terminal 113 275 IPR032861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0546 Alju-ChrAlju08 3920024 3921382 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0546 92 452 Miscellaneous Gene Families AT1G77480 29.208 1.58e-20 91.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g0546 08 3920024 3921382 Alju08g0546 08 3920024 3921382 ECH