Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0543 ATGACTAACAAAGCTCCGGAAGTGTCTCAGGGAGATGGCGGTACTTCTCTACCCTCTTCTCAGCCTGGGCCACCAGAGCATCAGCGTTCGCGTGGCAGCAATGGCAATACGATTTTCAAGAGTGGGCCACTTTACATATCTTCAAAAGGAATTGGATGGACATCTTGGAAGAAACGGTGGTTTGTTTTAACACGCACTTCGCTGGTTTTCTTCAGAAGTGATCCGAATGTTGTTCCTCAAAAGGGGGGTGAAGTGAATTTAACGCTTGGTGGCATTGACCTCAACAATTCAGGCAGTGTTGTTGTCAAAGCAGATAAGAAACTTTTGACCGTGCTTTTTCCTGATGGACGAGCTTTCACACTTAAGGCTGACACTGTAGAGGACTTACATGAATGGAAGACTGCACTTGAGAATGCTTTGTCCCAAGCCCCGGGTGCTTCTGATGTAACGGGGGAAAATGCAAAGGATGTAGAACCAGCAAAATCTACAGTTGTTGGCCGGCCAATTTTACTTGCTCTGGAGGATGATGATGGAGCTCCATCGTTTTTGGAGAAAGCCCTGAGGTTCATAGAAGATCATGGGGTCAAAGTTGAAGGGATCTTGCGACAGGCAGCTTCTGTTGATGATGTTGAATGTCGAGTTCGGGAATATGAACAGGGAAAAACTGAATTCTCTGCTGATGAGGATCCGCATGTTGTTGCCGATTGTTTGAAGTATGTACTCAGGGAATTACTTTCATCTCCAGTCCCTGCATCTTGCTGCAAGGCTCTGTTAGAAGCATGCCGGACTGAACGTGCTGGTAGGATCTCTGCTATCCGTGCTGCAATATGTGAGACTTTCCCTGAACCAAATCGCCGTTTATTGCAAAGAATACTCCAAATGATGCAAACGGTGGCTTCCCACAAAACTGTGAATAGAATGAGCTCCTCTGCTGTGGCAGCTTGCATGGCACCCTTACTTCTTCGTCCCCTTCTGGCTGGGGAATGCAACATTGAAAATGATTTTGATGTGGGTGGTGATGGTTCTGTTCAACTTCTACAAGCAGCTGCTGCCGCTAACCATGCTCAAACAATTGTTATAACATTATTAGAGGAATATGACAGCATATTTGGGGAGGAAGGATCTGGATCCGCAGGCATATACTCTGATTCAGAAGAGAGTGGATCTGGGAGCGAGGAGGGTACTGAAGATGATGAATCTTATGACGATGATGATGATGATTGTGATGAAGAATCAATACAGGAGTCCGATGCAGATGCAGAGGACAGTGAGATTGAAGACTCAGGCGGCGAGGATGATAAGAACCGTGATCACTCAAGGTCAGATGTAAAACCCTCAGGTGACCATGAAGATCCTAAAGTCAACCAGATATCATCACAGCCTAGTGAGGTCTCACTATCTCAGGATGTTGACATCAAGAGCCGTGAAAATCTGACGAGTTCAGCCAGGACTGCTCGTGCGGAGAAGTCCAGCACACCTGCAAACATAGTTGAAGTTGTTTCCACTGACCAGAGTACAGTACATAATTCAAGTTGTCCTATTGACAACAAATCAACAGACATATCTGATGATCCAGCACATGCTTCGAGCCACACAATATCGGGACGTACTTCTGCAATGAAGAATCATGCCACGGAAACTGCTGATTCTTCTACCAATGCAGCTGAGATGGAGAATCTTGAAGCTATCAAGGTAGAATTGCAAAACAAAATCACAGAGGAGTCTAACGCAAACCTGCAAACTTATCTGGAAAAACAAAAGAAATTCATGCATGAGCGTCGCCTGGCTCTTGAACAAGATGTGGCTAGACTACGGGAACAGTTGCAAAAGGAGAAGAATTATTGGGCAACTCTAGAAGCAGGAAACAAGTATTCTCCTGGATCCTCATCCAATTCAACCAGTGATGAAAGGACTAAGGCAGACGTTGAGGAAATAGCTCTCATAGAAGCAGATCTCACCAAGTTGCGGCAGCGGATTGATGATGTTGGCAGGAGGTTTAATGTACAACATGAGCACACTTCAAATCACGAAACAAAATTGAAGAATAAGCTGGATACCGAAGATGCAGTTACTTTTCAGTCTCAGATTGAAAGGTCAAAACGCAAGGACGTTAAGTTTGGTGGAACCGAAAGTGAGAATGAGAAAAAGTTGGAACCAACATCTTTACTGAACAAATATGCACCTCAAGCTACTCCCAAAAAAGCTGGGGCAAAGGTTGAGCAACAGGTATCAAACTTCACTGCTTCTAGACTGACTAAACTGTCCACCAGACTAAACTTTCTGAAGGAGCGTCGAAATCAAATTCAGCAGTCACAGCAACCTCTCAATAATAAGCCTCGAGGATCTGAAGCTCATTCTGTATCTAACCCAGAAAAGGGTAGAGCCATGGACAGTTCCCAGCCACCCTCAATTGCAGATAAAGGTTCAGGCAAAGAACCTCAATCACTCCAAAATTCGGACAAAATGAGAAAATCAGATGGTCAGTCAACAATCCATCCAGATAAATGGAATCAAAATCAATCCTGGGAAAGAAGAAGGTCCGAAGGTGATCAGTCTTATAATGTGGATAAAGGTCGATAA 2580 0.4457 MTNKAPEVSQGDGGTSLPSSQPGPPEHQRSRGSNGNTIFKSGPLYISSKGIGWTSWKKRWFVLTRTSLVFFRSDPNVVPQKGGEVNLTLGGIDLNNSGSVVVKADKKLLTVLFPDGRAFTLKADTVEDLHEWKTALENALSQAPGASDVTGENAKDVEPAKSTVVGRPILLALEDDDGAPSFLEKALRFIEDHGVKVEGILRQAASVDDVECRVREYEQGKTEFSADEDPHVVADCLKYVLRELLSSPVPASCCKALLEACRTERAGRISAIRAAICETFPEPNRRLLQRILQMMQTVASHKTVNRMSSSAVAACMAPLLLRPLLAGECNIENDFDVGGDGSVQLLQAAAAANHAQTIVITLLEEYDSIFGEEGSGSAGIYSDSEESGSGSEEGTEDDESYDDDDDDCDEESIQESDADAEDSEIEDSGGEDDKNRDHSRSDVKPSGDHEDPKVNQISSQPSEVSLSQDVDIKSRENLTSSARTARAEKSSTPANIVEVVSTDQSTVHNSSCPIDNKSTDISDDPAHASSHTISGRTSAMKNHATETADSSTNAAEMENLEAIKVELQNKITEESNANLQTYLEKQKKFMHERRLALEQDVARLREQLQKEKNYWATLEAGNKYSPGSSSNSTSDERTKADVEEIALIEADLTKLRQRIDDVGRRFNVQHEHTSNHETKLKNKLDTEDAVTFQSQIERSKRKDVKFGGTESENEKKLEPTSLLNKYAPQATPKKAGAKVEQQVSNFTASRLTKLSTRLNFLKERRNQIQQSQQPLNNKPRGSEAHSVSNPEKGRAMDSSQPPSIADKGSGKEPQSLQNSDKMRKSDGQSTIHPDKWNQNQSWERRRSEGDQSYNVDKGR 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0543 859 Coils Coil 587 614 - -
Alju08g0543 859 Pfam PH domain 40 140 IPR001849 -
Alju08g0543 859 SMART RhoGAP_3 177 367 IPR000198 GO:0007165
Alju08g0543 859 MobiDBLite consensus disorder prediction 389 428 - -
Alju08g0543 859 MobiDBLite consensus disorder prediction 838 859 - -
Alju08g0543 859 MobiDBLite consensus disorder prediction 792 824 - -
Alju08g0543 859 CDD PH 40 136 - -
Alju08g0543 859 MobiDBLite consensus disorder prediction 452 554 - -
Alju08g0543 859 Pfam RhoGAP domain 180 323 IPR000198 GO:0007165
Alju08g0543 859 CDD RhoGAP 180 318 - -
Alju08g0543 859 MobiDBLite consensus disorder prediction 767 859 - -
Alju08g0543 859 SMART PH_update 38 143 IPR001849 -
Alju08g0543 859 ProSiteProfiles Rho GTPase-activating proteins domain profile. 171 370 IPR000198 GO:0007165
Alju08g0543 859 SUPERFAMILY GTPase activation domain, GAP 175 372 IPR008936 -
Alju08g0543 859 Coils Coil 645 665 - -
Alju08g0543 859 PANTHER RHO GTPASE-ACTIVATING PROTEIN 7 14 714 - -
Alju08g0543 859 MobiDBLite consensus disorder prediction 698 724 - -
Alju08g0543 859 MobiDBLite consensus disorder prediction 429 451 - -
Alju08g0543 859 Coils Coil 557 577 - -
Alju08g0543 859 MobiDBLite consensus disorder prediction 767 784 - -
Alju08g0543 859 MobiDBLite consensus disorder prediction 698 719 - -
Alju08g0543 859 Pfam Leucine-zipper of ternary complex factor MIP1 591 665 IPR025757 -
Alju08g0543 859 SUPERFAMILY PH domain-like 19 140 - -
Alju08g0543 859 MobiDBLite consensus disorder prediction 1 36 - -
Alju08g0543 859 Coils Coil 751 771 - -
Alju08g0543 859 ProSiteProfiles PH domain profile. 37 141 IPR001849 -
Alju08g0543 859 MobiDBLite consensus disorder prediction 373 554 - -
Alju08g0543 859 Gene3D - 26 142 IPR011993 -
Alju08g0543 859 Gene3D Rho GTPase activation protein 149 372 IPR008936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0543 Alju-ChrAlju08 3906792 3917478 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g0543 08 3906792 3917478 Alju08g0543 08 3906792 3917478 ECH