Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0469 ATGGACAGCAGGTGGCCAGGGCGAAGTGAGAATGATTGTGGTTCAGATTGCTTATTGGCCCATGACTGCATAGGGGCCGCCATTGCCATTAACATTTGGTTGTCGTTGGTATCAAATACTCATTTGGACAAAATGCAGCTGTCAGCCATTTTCCTCGCGTCATTGCTTCTGCTCTCTGAAGCGGTGGCCCCTGCCGACTTCACTCAGCCGCCGCCTCCTTTTGCCTGTGACCCGTCCAATCCAGCCACCTCATCCTACCCATTCTGCAACTCCAAGCTCAGCTTGTCTCGAAGAGCCCAAGACCTTGTTTCCCGCCTTTCATTGGACGAGAAGCTCGCTCAACTAGTGAACGACGCTCCTCCCATTCCTCGCCTCGGTATCCCCGCTTACCAATGGTGGAATGAGGCCTTACACGGAGTCTCCAACGCCGGACGTGGAATCCGATTCGATGCCTCCATTACTTCTGCTACCAGCTTCCCTCAAGTCATCCTCTCCGCCGCCACCTTCGACTCCCACCTCTGGTACAGAATCGGTCAGGCCATTGGAGTGGAGGCGAGGGCAATCTATAATGCAGGGCAAGCCATGGGGATGACATTTTGGGCTCCAAACATTAACATCTTTAGGGATCCGAGATGGGGGAGAGGGCAAGAGACGGCCGGCGAAGACCCACAGCTTAGTTCCAAGTACGCTGTGTCGTATGTGAGAGGGGTACAAGGCGATTCCTTCCAGGGAGGCAAACTCACCGGTCATCTTCAAGCTTCTGCTTGTTGCAAGCATTTCACCGCTTACGATTTGGACAACTGGAAGGGTGTGAATCGCTTCGTCTTCGATGCTCGCGTCACTTTGCAAGATTTAGCGGACACATATCAGCCTCCATTTCAGAGTTGCATTGAGCAAGGACGAGCAAGTGGGATAATGTGCGCTTATAACCGTGTGAATGGGGTTCCAAACTGCGCAGATTTCAACCTCTTGACTAAAACCGCCAGAAAACAATGGGGTTTTCATGGGTACATCACTTCCGATTGTGGCGCAGTCTCCCTCCTTCATCATAATCAAGGATATGCGAAATCGGCGGAGGATGCTGTGGCCGACGTCCTTCGGGCTGGAATGGATGTAGAGTGCGGTGATTACTTGACGAAGTATGCTAAATCAGCAGTGGTGCAGAAAAAACTACCAATAACTCAAGTAGATCGTGCACTTCACAACCTGTTCTCAATAAGAATAAGGCTGGGTCTATTCGACGGGAATCCGGCCAAACTCTCATTCGGCACGATCGGTCCTAATCAAGTGTGTTCAAAAGATCACCTGTATTTAGCTCTTGAAGCTGCCAGAAACGGCATTGTCCTTTTGAAGAACTCTGCTAGACTTCTCCCACTCCCTAAAACAATTTCCCTTGCACTCATAGGTCCTAACGCCAATGCTTCCCCTTTAACTCTCCTAGGAAACTATGCAGGCCCCCCCTGTAAACTTGTGACGCCATTGCAGGCCTTTCAGCACTATGTTAAGAACACCATTTATCACCCCGGTTGTGATGATGGCGTCAAGTGTTCTTCGGCTCAGATTGGCAAGGCCGTGGAAATCGCCGCGAAGGTGGATTACGTGGTGCTGATGATGGGTTTGGATCAAAGTCAGGAGAGGGAAGATCGTGATCGGGTTCACCTGGACTTACCTGGCAAGCAGCTGGAACTCATACACAGCGTTGCTAAAGCTTCCAAGAGGCCTGTCATTTTGGTGATCTTTTCCGGTGGCCCTCTTGATATTTCTCCGGCCAAGTATAACAACAAAGTTGGAGGCATCCTCTGGGCCGGTTATCCCGGAGAAGCTGGAGGAATCGCACTTGCTCAGATTATCTTTGGCGATCACAACCCAGGAGGAAGATTACCAGTGACTTGGTACCCAAAAGATTTCACAAGAGTGGCAATGACAGACATGAGGATGCGAGCTGATCCATCTTCTGGGTATCCGGGACGGACTTACCGGTTTTACACGGGTCCAAAGGTGTATGAGTTCGGGTATGGCCTAAGCTACTCTAGATATTCGCACGAGTTCGTCTCTGTCACGCAAAACAAATTTCACTTGAATCAATCGTGGCCTTATTTGATAGTTGAGAATTCGGAGACAATTCGCATCAAATCAGTAGCAGAGATGGGTGCAAAATTGTGCGAAAGCATGTCAGTGTCAGTGACGGTGGGAGTAAAAAACCATGGAAGTATGGAGGGGAAGCATTCGGTCTTGTTATTTACAAGGCATGCAAAACAGAGAAATGGGAATCCGATCAAACAGTTGGTGGGCTTTGAGAGTGTGATGTTGGGTGCAGGGGAAAGGGCTGAAGTTGGATTTGAGATAAGGCCTTGTGAGCATCTGAGTAGAGCAAGCGAGGGTGGGTCCAAAGTCATTGAAGAAGGGTCCCACCTTTTGATTGTAGGGGATGAAGAGTATCAAATTGACGTCATTTTCTGA 2460 0.4976 MDSRWPGRSENDCGSDCLLAHDCIGAAIAINIWLSLVSNTHLDKMQLSAIFLASLLLLSEAVAPADFTQPPPPFACDPSNPATSSYPFCNSKLSLSRRAQDLVSRLSLDEKLAQLVNDAPPIPRLGIPAYQWWNEALHGVSNAGRGIRFDASITSATSFPQVILSAATFDSHLWYRIGQAIGVEARAIYNAGQAMGMTFWAPNINIFRDPRWGRGQETAGEDPQLSSKYAVSYVRGVQGDSFQGGKLTGHLQASACCKHFTAYDLDNWKGVNRFVFDARVTLQDLADTYQPPFQSCIEQGRASGIMCAYNRVNGVPNCADFNLLTKTARKQWGFHGYITSDCGAVSLLHHNQGYAKSAEDAVADVLRAGMDVECGDYLTKYAKSAVVQKKLPITQVDRALHNLFSIRIRLGLFDGNPAKLSFGTIGPNQVCSKDHLYLALEAARNGIVLLKNSARLLPLPKTISLALIGPNANASPLTLLGNYAGPPCKLVTPLQAFQHYVKNTIYHPGCDDGVKCSSAQIGKAVEIAAKVDYVVLMMGLDQSQEREDRDRVHLDLPGKQLELIHSVAKASKRPVILVIFSGGPLDISPAKYNNKVGGILWAGYPGEAGGIALAQIIFGDHNPGGRLPVTWYPKDFTRVAMTDMRMRADPSSGYPGRTYRFYTGPKVYEFGYGLSYSRYSHEFVSVTQNKFHLNQSWPYLIVENSETIRIKSVAEMGAKLCESMSVSVTVGVKNHGSMEGKHSVLLFTRHAKQRNGNPIKQLVGFESVMLGAGERAEVGFEIRPCEHLSRASEGGSKVIEEGSHLLIVGDEEYQIDVIF 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0469 819 SMART Fn3_like_2 742 812 IPR026891 -
Alju08g0469 819 PRINTS Glycosyl hydrolase family 3 signature 253 269 IPR001764 GO:0004553|GO:0005975
Alju08g0469 819 PRINTS Glycosyl hydrolase family 3 signature 159 178 IPR001764 GO:0004553|GO:0005975
Alju08g0469 819 PRINTS Glycosyl hydrolase family 3 signature 327 345 IPR001764 GO:0004553|GO:0005975
Alju08g0469 819 Gene3D Immunoglobulins 705 818 IPR013783 -
Alju08g0469 819 Pfam Glycosyl hydrolase family 3 N terminal domain 153 403 IPR001764 GO:0004553|GO:0005975
Alju08g0469 819 PANTHER SUGAR HYDROLASE-RELATED 62 815 IPR044993 GO:0009044|GO:0045493
Alju08g0469 819 Pfam Fibronectin type III-like domain 743 810 IPR026891 -
Alju08g0469 819 FunFam probable beta-D-xylosidase 7 98 419 - -
Alju08g0469 819 Pfam Glycosyl hydrolase family 3 C-terminal domain 447 676 IPR002772 GO:0004553|GO:0005975
Alju08g0469 819 Gene3D - 98 421 IPR036962 GO:0004553|GO:0005975
Alju08g0469 819 SUPERFAMILY (Trans)glycosidases 86 445 IPR017853 -
Alju08g0469 819 Gene3D - 432 677 IPR036881 GO:0004553|GO:0005975
Alju08g0469 819 FunFam probable beta-D-xylosidase 2 432 677 - -
Alju08g0469 819 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 447 679 IPR036881 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0469 Alju-ChrAlju08 3365127 3372648 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0469 71 817 Glycoside Hydrolase AT1G78060 65.160 0.0 1010
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g0469 08 3365127 3372648 Alju08g0469 08 3365127 3372648 ECH