Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0446 ATGGATTTGTCGGGTGCTCAGTCGGGCCTATCTCTTGGCTTAAACGGACAGATTTCGTCACCGGCTTTGGCAGGCTATGTTGATGATAATTTAGCTTCCTTTCGACAGAATTCGAGCTTTGGTAGTTCCTCCAGTACAACTCCTTTTGTTCCGTTGCATCTACTCGAGGAAAAAGACGACATGGTTAGGGTCAAATCCAGTGAAGAAACAGAGGAGGAGGAAGAGGAAGGAGCAGTGGAAGATGAAGCGATTGACTTTATGGGTCGGCCTGTATGTGCGAAGAGGAAACTAGAGGGACATCCGAATTTCTCTTCGAATCCTCCAAAGCGGCTTGCTGTCGATTGGGGGCTTGACGCGAGGCGAGCTTCAGTGCAGTCTTTGGCGAATCAGCCAGTGGAGGTAGCTGACGCCGAGATTCATGAAATAATTGAGAAGGAAAAGCGGAGACAGTTCTCAGGAATAGAATTGATTGCTTCTGAGAATTTTGTGTGCAGAGCTGTCCTGGAAGCTTTGGGAAGTCATTTGACGAACAAGTACTCTGAGGGAATGCCTGGAGCTAAATACTACACAGGGAATCAGTTTATTGATCAGATGGAATTGCTTTGCTGTAAGCGTGCACTGGCTGCCTTCGATCTCAATCCAAGCAAGTGGGGCGTGAACGTTCAGCCTTACTCATGTACTTCTGCTAACTTTGCCGTGTACACTGGTATTTTGCATCCAGGGGATCGAATCATGGGTCTGGATCTGCTATCCGGTGGGCATCTGAGTCATGGATATTATACCCACAGTGGAAAGAAGATTTCTGCAGCATCTATATTCTTTGAAACTCTTCCCTACAAAGTCAATCCTCTAACAGGCTACTTAGACTATGACAAGCTTGAAGAAAAAGCCTGCGATTATCGACCTAAACTGCTCATATGCGGAGGCAGTTCGTATCCTAGAGAATGGGATTATGCAAGGTTTAGGAAGATTGCTGATAAGTGTGGGGCTGTTTTGATGTGCGACATGGCTCATATTAGCGGCCTTGTGGCGGCTAAGGAAGTTGCTAGCCCATTTGATTACTGTGATATTGTTACTTCAACCACCCACAAAAGTCTCCGAGGTCCAAGGGGAGGTATCATCTTTTATAGGAAAGGTTCAAAACCCAGGAAGCAAGGTCTGGCTCTTAATCATGGGGATGATGGTAATTATGACTTGGAGGAAAAGATAAACTTCGCTTTATATCCATCCTTACAAGGAGGCCCGCACAATAATCACATTGCTGCTCTTGCCATAGCCTTAAAACAAGTCGCAACTCCAGAGTACAAAGTATATATGCAACAGGTAAGGAAAAATGCACAGGCGTTAGCATCTGCTTTGCTGAAAAGAAAGTGCAGACTGGTCACTGATGGCACTGACAATCACTTGTTGCTCTGGGACCTTACTGCACTCGGCTTACTTGATAGAAACTATGAGAAGGTCTGTGAGGCTTGTAATATCACACTCAACAAATGTGCCATTTATGGTTCTATTTCACCTGGAGGAGTGAGAATTGGTACTCCTGCAATGACAACAAGAGGTTGCTTAGAGGATGATTTTGAGATCATAGCTGATTTTCTTCTGAAGGCGGCACAGATTACCAGCAATATGCAGAAGGAATATGGAAAATCTTGTAAAGATTTCCTTAAAGGTCTTCAAAATAATAAAGATATTGTTGAGCTCAGAAATCAGGTTGAGGCATTTGCTTCCGAGCTTCCAATGCCAGCATTTGATATTTGA 1758 0.4454 MDLSGAQSGLSLGLNGQISSPALAGYVDDNLASFRQNSSFGSSSSTTPFVPLHLLEEKDDMVRVKSSEETEEEEEEGAVEDEAIDFMGRPVCAKRKLEGHPNFSSNPPKRLAVDWGLDARRASVQSLANQPVEVADAEIHEIIEKEKRRQFSGIELIASENFVCRAVLEALGSHLTNKYSEGMPGAKYYTGNQFIDQMELLCCKRALAAFDLNPSKWGVNVQPYSCTSANFAVYTGILHPGDRIMGLDLLSGGHLSHGYYTHSGKKISAASIFFETLPYKVNPLTGYLDYDKLEEKACDYRPKLLICGGSSYPREWDYARFRKIADKCGAVLMCDMAHISGLVAAKEVASPFDYCDIVTSTTHKSLRGPRGGIIFYRKGSKPRKQGLALNHGDDGNYDLEEKINFALYPSLQGGPHNNHIAALAIALKQVATPEYKVYMQQVRKNAQALASALLKRKCRLVTDGTDNHLLLWDLTALGLLDRNYEKVCEACNITLNKCAIYGSISPGGVRIGTPAMTTRGCLEDDFEIIADFLLKAAQITSNMQKEYGKSCKDFLKGLQNNKDIVELRNQVEAFASELPMPAFDI 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0446 585 Hamap Serine hydroxymethyltransferase [glyA]. 131 582 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Alju08g0446 585 PANTHER SERINE HYDROXYMETHYLTRANSFERASE 122 584 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Alju08g0446 585 CDD SHMT 136 574 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Alju08g0446 585 FunFam Serine hydroxymethyltransferase 161 379 - -
Alju08g0446 585 Pfam Serine hydroxymethyltransferase 133 532 IPR039429 -
Alju08g0446 585 SUPERFAMILY PLP-dependent transferases 120 583 IPR015424 -
Alju08g0446 585 ProSitePatterns Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 356 372 IPR019798 GO:0030170
Alju08g0446 585 Gene3D - 161 440 IPR015421 GO:0003824
Alju08g0446 585 Gene3D Aspartate Aminotransferase, domain 1 136 581 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0446 Alju-ChrAlju08 3216772 3220818 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g0446 08 3216772 3220818 Alju08g0446 08 3216772 3220818 ECH