Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0277 ATGCTTGTGAAGTTTGGGCTCCACGATCAAGACCAGGGTCATACGTTTCAAATCAATTGTCATTTTCGATTAAGATTTATGACAGTCCCTGATTCATTAATCCATGAAGTGGTTAAGACCGCGGCGGAACGCGCGAAATCACGAACTTTGACAGATTCGGCATGCAGAGTGCGTGAACGACTGGACGGAGGGAGAAAACGACGTCGTCAAGGAGATACATTCTGTAAACGCCGTTCCATTTTGGCGGCCACATTCGGGCTTAGAGGAAAGCAAAGGAGAGAAGAAGAAAGAGAGAAAGAAACCGTTCAATCAAAGAAGGGGGCTGGATCGATCCCGTACCCGTCCCTAGGCATTTTTATAAGAGATATTTGCCATCTCAAATCAATCAGTTTCCCGTTTCAACTCTTATCTTCTCCTTCCGAATCGAGGGCCTCTCTCAGTTTTCTCTTCGGTCTCACCATGGCATCGAAGCGGATCTTGAAGGAACTCAAGGATTTGCAGAAGGATCCGCCTACTTCTTGCAGCGCCGGTCCTGTTGCCGAAGATATGTTTCATTGGCAAGCAACAATTATGGGTCCTCCTGACAGTCCTTATGCTGGAGGGGTTTTCCTAGTTACTATCCATTTTCCTCCAGATTACCCCTTTAAGCCACCCAAGGTTGCATTCAGGACGAAGGTATTCCACCCAAATATAAATAGCAATGGAAGCATTTGTCTTGACATATTGAAGGAACAATGGAGCCCAGCTTTAACTATTTCAAAGGTGTTACTATCTATTTGTTCCCTGTTGACGGACCCCAACCCTGATGATCCTTTGGTTCCTGAGATCGCCCACATGTACAAGACAGACAGGAACAAGTATGAATCAACTGCAAGAAGTTGGACCCAGAAATATGCTATGGGCTAA 906 0.457 MLVKFGLHDQDQGHTFQINCHFRLRFMTVPDSLIHEVVKTAAERAKSRTLTDSACRVRERLDGGRKRRRQGDTFCKRRSILAATFGLRGKQRREEEREKETVQSKKGAGSIPYPSLGIFIRDICHLKSISFPFQLLSSPSESRASLSFLFGLTMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYESTARSWTQKYAMG 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0277 301 SMART ubc_7 157 300 - -
Alju08g0277 301 Gene3D Ubiquitin Conjugating Enzyme 151 301 IPR016135 -
Alju08g0277 301 SUPERFAMILY UBC-like 146 300 IPR016135 -
Alju08g0277 301 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 227 242 IPR023313 -
Alju08g0277 301 Pfam Ubiquitin-conjugating enzyme 158 294 IPR000608 -
Alju08g0277 301 MobiDBLite consensus disorder prediction 88 104 - -
Alju08g0277 301 FunFam Ubiquitin-conjugating enzyme 28, E2 154 301 - -
Alju08g0277 301 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 182 288 - -
Alju08g0277 301 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 154 300 IPR000608 -
Alju08g0277 301 MobiDBLite consensus disorder prediction 88 108 - -
Alju08g0277 301 CDD UBCc 156 295 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0277 Alju-ChrAlju08 2033993 2039395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0277 155 267 Miscellaneous Gene Families AT3G17000 36.975 3.77e-19 84.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g0277 08 2033993 2039395 Alju08g0277 08 2033993 2039395 ECH