Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0242 ATGATTTCAAATCCGAACTTCATCCATTACGCCTGCATTGCGAAAGGAACCACAATTCTCGCCCAACGTGGGTCCAAGGAACCAAATATCGAAGAATTAGCGGCAAAATGTCTCGAGCGAGCTCCTCCCAATCATTCCATGTTTTCTCACACTGTTAGGAAAAGGACTCATGCGTTCTTAATTGACGAAGATTTTGTTTATTTCGCGATTTTCGATGAAAATCTCGTGAAGACGGAGGCTCTTTGGTTTTTAGATCGCATCAAGGATGCATTGGACACGATATTGAAAGGCAGGTCTATCAAGGATTCTTATGATTTCTTGCCGCTTTGTTTCCAAGATGAATTCGATCCTATCTTTGGAGAATCGATGGCTTCCGATTTGCTATCGGAAAAGCCATTGCTGGGCGAAAACAAGGATGATCGAAATCCTAGCGTGGGATCCGTGAATGAGAAGAAATTGGTGATGGTAGCTGTGCTTGAGCAGCCTAGTAAAGGTTTGACGAAGAAGAAAAGGGTGAGTACAGAAGGCGATGGAATTGATGGTAAGGATGCTACGATGGAGAATAAATTAGATGTGGTCGATGATATAAATGGCTACACCAGAGATTTTGCCTTGTCGGTACCCAACGATCGACATAAAGCAAAGCGGATGTGGAAGAAATATGTGTGGGCGGTGCTATTGTTCGACATATTTGTTTGCGCGATGCTATTTGTAATTTGGCTATGGGTTTGCAGAGGGTTTAAGTGCATGCGGAGCTGA 759 0.4348 MISNPNFIHYACIAKGTTILAQRGSKEPNIEELAAKCLERAPPNHSMFSHTVRKRTHAFLIDEDFVYFAIFDENLVKTEALWFLDRIKDALDTILKGRSIKDSYDFLPLCFQDEFDPIFGESMASDLLSEKPLLGENKDDRNPSVGSVNEKKLVMVAVLEQPSKGLTKKKRVSTEGDGIDGKDATMENKLDVVDDINGYTRDFALSVPNDRHKAKRMWKKYVWAVLLFDIFVCAMLFVIWLWVCRGFKCMRS 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0242 252 Gene3D Longin domain 2 126 - -
Alju08g0242 252 ProSiteProfiles Longin domain profile. 12 119 IPR010908 -
Alju08g0242 252 CDD Longin 10 124 IPR010908 -
Alju08g0242 252 SMART Longin_2 33 118 IPR010908 -
Alju08g0242 252 PANTHER PHYTOLONGIN PHYL1.2 1 250 IPR044783 GO:0016020
Alju08g0242 252 SUPERFAMILY SNARE-like 8 99 IPR011012 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0242 Alju-ChrAlju08 1742953 1743711 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0242 10 249 Miscellaneous Gene Families AT3G54300 27.200 3.95e-16 73.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g0242 08 1742953 1743711 Alju08g0242 08 1742953 1743711 ECH