Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0229 ATGGGTGAGTGGCAATCACTTGTCCAATCCATTGTTCTTGGTCTCATTTTCTCTTACCTCCTTGCCAAGCTCATATCCATCCTCGTATCATTCAAGGACGATAATCTGACTATAACTCGCCGCAGTATTAGTAGCACCGACCATGTAAGTATTCGAAGCAAGGTAGACCCCGATGCCAACCCGTTTGTGAGCAGGCCTGATGCCGATGAAGGCGAGCATCACGAGAATGAATCGATCTTGGCGGAGCAGGGCAGCGTGAGAAATGACAGTGTGGACGGTGATGACGACGATGACGACGATTGGGAGGGAGTGGAAAGTACAGAATTGGACGAGGCCTTCAGTGCCGCAACGGCTTTTGTGGCTGCCGCCGCCGCCGATCGGCTCTCTCAGAAGGTGTCCAGTGATATGCAGCTCCAGCTATATGGGCTGTACAAAATTGCAACCGAAGGACCTTGTAGCACGCCACAGCCTTCGGCACTGAAAATGACGGCCCGAGCCAAATGGCAAGCATGGCAGAAACTGGGTGCCATGCCTCCTGAAGATGCAATGCAGAAGTATATTGATATTGTGACAGAGCTTTATCCAACCTGGTTAGATGGCTCGGCTTTGCAGAGGAGCAAAAGTGGAGATGATGTTGGCCCAAATTCAGGGTCTTCAGAATCTAAGGGACCAATGGGGCCTGTATTCAGCACTTTTGTGTATGAAGAGGAAGCTGGCAGTGATTTAAAAATTGATGAAATTCACGGGTATGCCAGAGAAGGAGACTCCACTAATCTGCTCAAGTGTATTGAAAATGGTGTTTCAGTGAATCTGAAGGACAGCGAGGGTCGGACACCATTGCATTGGGCTGTGGATCGCGGTCACCTTGAGGTCACAGAACTGCTAGTTAGTAGGAATGCTGATGTAAATGCCAAGGATGATGATGGGCAAACTCCATTGCATTATGCTGTTGTGTGCGAGAGAGAGGCCATAGCTGAGTATTTAGTGAAGCATAATGCGGACCCAGATTTGAAAGATAATGATGGCAGTTCGTCACGTGACCTCTGCAAGCCAAACTGGCGTTGCATGCAACCTGTGGGGAATTAA 1086 0.4926 MGEWQSLVQSIVLGLIFSYLLAKLISILVSFKDDNLTITRRSISSTDHVSIRSKVDPDANPFVSRPDADEGEHHENESILAEQGSVRNDSVDGDDDDDDDWEGVESTELDEAFSAATAFVAAAAADRLSQKVSSDMQLQLYGLYKIATEGPCSTPQPSALKMTARAKWQAWQKLGAMPPEDAMQKYIDIVTELYPTWLDGSALQRSKSGDDVGPNSGSSESKGPMGPVFSTFVYEEEAGSDLKIDEIHGYAREGDSTNLLKCIENGVSVNLKDSEGRTPLHWAVDRGHLEVTELLVSRNADVNAKDDDGQTPLHYAVVCEREAIAEYLVKHNADPDLKDNDGSSSRDLCKPNWRCMQPVGN 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0229 361 ProSiteProfiles Ankyrin repeat region circular profile. 275 307 - -
Alju08g0229 361 MobiDBLite consensus disorder prediction 49 102 - -
Alju08g0229 361 PRINTS Ankyrin repeat signature 276 291 IPR002110 GO:0005515
Alju08g0229 361 PRINTS Ankyrin repeat signature 324 338 IPR002110 GO:0005515
Alju08g0229 361 Pfam Acyl CoA binding protein 110 190 IPR000582 GO:0000062
Alju08g0229 361 Pfam Ankyrin repeats (3 copies) 248 339 IPR002110 GO:0005515
Alju08g0229 361 Gene3D - 103 215 IPR014352 -
Alju08g0229 361 ProSiteProfiles Ankyrin repeat region circular profile. 308 340 - -
Alju08g0229 361 SMART ANK_2a 308 337 IPR002110 GO:0005515
Alju08g0229 361 SMART ANK_2a 275 304 IPR002110 GO:0005515
Alju08g0229 361 Gene3D - 235 353 IPR036770 -
Alju08g0229 361 MobiDBLite consensus disorder prediction 63 80 - -
Alju08g0229 361 ProSiteProfiles Acyl-CoA-binding (ACB) domain profile. 109 199 IPR000582 GO:0000062
Alju08g0229 361 PRINTS Acyl-coA-binding protein signature 155 170 IPR000582 GO:0000062
Alju08g0229 361 PRINTS Acyl-coA-binding protein signature 176 193 IPR000582 GO:0000062
Alju08g0229 361 PRINTS Acyl-coA-binding protein signature 132 150 IPR000582 GO:0000062
Alju08g0229 361 MobiDBLite consensus disorder prediction 205 227 - -
Alju08g0229 361 ProSiteProfiles Ankyrin repeat profile. 308 340 IPR002110 GO:0005515
Alju08g0229 361 PANTHER ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 6 2 353 - -
Alju08g0229 361 SUPERFAMILY Ankyrin repeat 247 349 IPR036770 -
Alju08g0229 361 ProSiteProfiles Ankyrin repeat profile. 275 307 IPR002110 GO:0005515
Alju08g0229 361 MobiDBLite consensus disorder prediction 208 225 - -
Alju08g0229 361 SUPERFAMILY Acyl-CoA binding protein 108 198 IPR035984 GO:0000062
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0229 Alju-ChrAlju08 1681818 1685591 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0229 1 357 Acyl Lipid Metabolism Gene Families AT5G53470 62.745 5.53e-150 424
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g0229 08 1681818 1685591 Alju08g0229 08 1681818 1685591 ECH