Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0186 ATGGCCACTACGCTCTTCTCCGCCTTTCACGCCTCTTATCTCCCGCCACCCTCACATTCCTCTTCTTCTGCTTCTTCCTCCACTCCCTGTTTGCCTACCACGTCTCATTTTCTGAGGCAATCCACAAAGTCCATCGCTTTCTTTACTCCGTCTGAGATACTCAAATGCGCTGCTTTTGCACCCAGAACCAGAAGCAACCGTGCAGGTTCACTCCTTGTTCGTATGTCTTGGGACGGACCCCTCGCTTCCGTCAAATTGATCAAGCAGGCCAAAAATGTCGAGTTGACGGATGCGGTGAAGCAGTACGTGGAGGAGAAGGTCGGAAAGGCAGTTCAGAATCATAGTCACCTGGTTAGGGAGGTGGATGTGAGGTTATCTGTACGAGGAGGAGGAGAATTCGGGAAAGGACCCCTCACCAAACGATGTGAGGTAACTTTGTTCACGAAGAGGCACGGAGTGGTGCGGGCCGAGGAAGAAGCAGAGACTATGTATGGGAGCATAGATTTGGTATCATCAATAATTCAGAGGAAGCTAAGGAAGATAAAGGAAAAGGTGTCAGATCGTGGTCGCCACATGAAGGGCTTCAGTTGGTCGTCGAAAGTGAGGGAGCCTGTAACTCCTTTGCCCCTCCATGACACTGATACAGACATGCCCCCCCAGCAGGATGAGCAATTCATAGATGAGGTTGTCCGCACAAAATACTTTGAGATGCCACCGTTGACTGTAAGCGAAGCAATTGAGCAGCTGGAAAATGTTGATCATGACTTCTATGGTTTTCGAAATGAAGACACCGGGGAGATTAATATAGCGTACAGAAGGAAAGAAGGAGGCTATGGACTCATAATACCCAAAGGAGATGGCAGAGCGGAGAAATTGGAGCCTCTGGTGGTTGAAACTGCAAGGGGATGA 909 0.495 MATTLFSAFHASYLPPPSHSSSSASSSTPCLPTTSHFLRQSTKSIAFFTPSEILKCAAFAPRTRSNRAGSLLVRMSWDGPLASVKLIKQAKNVELTDAVKQYVEEKVGKAVQNHSHLVREVDVRLSVRGGGEFGKGPLTKRCEVTLFTKRHGVVRAEEEAETMYGSIDLVSSIIQRKLRKIKEKVSDRGRHMKGFSWSSKVREPVTPLPLHDTDTDMPPQQDEQFIDEVVRTKYFEMPPLTVSEAIEQLENVDHDFYGFRNEDTGEINIAYRRKEGGYGLIIPKGDGRAEKLEPLVVETARG 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0186 302 Pfam Sigma 54 modulation/S30EA ribosomal protein C terminus 227 280 IPR032528 -
Alju08g0186 302 Pfam Sigma 54 modulation protein / S30EA ribosomal protein 89 185 IPR003489 GO:0044238
Alju08g0186 302 SUPERFAMILY Ribosome binding protein Y (YfiA homologue) 88 191 IPR036567 -
Alju08g0186 302 CDD RaiA 85 184 IPR003489 GO:0044238
Alju08g0186 302 FunFam ribosome-binding factor PSRP1, chloroplastic 239 290 - -
Alju08g0186 302 Gene3D - 239 288 IPR038416 -
Alju08g0186 302 FunFam Ribosome-binding factor PSRP1, chloroplastic 86 189 - -
Alju08g0186 302 NCBIfam ribosome-associated translation inhibitor RaiA 89 189 IPR003489 GO:0044238
Alju08g0186 302 Hamap Ribosome hibernation promoting factor [hpf]. 84 284 IPR034694 -
Alju08g0186 302 Gene3D - 85 195 IPR036567 -
Alju08g0186 302 PANTHER 30S RIBOSOMAL PROTEIN 71 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0186 Alju-ChrAlju08 1425771 1427169 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g0186 08 1425771 1427169 Alju08g0186 08 1425771 1427169 ECH