Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0183 ATGGATAACTCCACTCAAGAATCTCGCCTGCGATCCGAACACTCCGTTACCTATGATTCCCCTTATCCAATCTACGCCATGGCCTTCTCTTCCACCCCTTCTCTCGCTTCTCCACTCCAACGAATCGCAGTTGGTAGCTTCATTGAAGATTACAATAACCGCGTCGATATTATCTCCTTCAACGCTGACTCTTCCTCCGTTCGACACCAACCTTCCCTCTCTTTCGACCACCCCTACCCGCCCACTAAACTTATGTTCCACCCTAACGCTCACTCTTCCCTTCGAAAATCCTCCTCCGACCTTCTCGCCACTTCCGGTGACTATCTTCGCCTCTGGGAGGTTCGGGAAAATTCCGTCGACGCAATTTCACTTCTTAACAATAGCAAGACCAGCGAGTTCTGTGCCCCTTTGACCTCCTTCGATTGGAACGACATCGAACCCAAGAGAATTGGGACTTCCAGCATCGACACTACTTGTACGATTTGGGATATCGAAAAGGGGGTTGTCGAAACGCAGTTAATTGCGCACGATAAGGAGGTTTATGACATTGCTTGGGGCGAGGCTAGAGTGTTTGCGTCTGTTTCGGCGGATGGTTCTGTTAGAATCTTCGATCTGAGGGACAAGGAGCACTCCACGATTATATACGAGAGTCCGCAGCCAGATACGCCTCTGCTCAGGTTGGCTTGGAATAAGCAGGACCTAAGGTACATGGCTACCATACTGATGGATAGCAGTAAGATTGTGATATTGGATATTAGATCACCGACCATGCCGGTGGCGGAGTTGGAGAGGCATCGTGCTTGCGTGAATGCCATTGCTTGGGCTCCCCAGAGTAGTAGGCATATTTGTTCGGCGGGGGATGATTCGCAGGCCCTAATTTGGGAATTGCCTACTGTAGCTGGACCTAATGGAATTGATCCCATCTCTATGTATTCTGCTGGCTCTGAAATTAATCAACTGCAATGGTCTGCTGCTCAGCCTGACTGGATTGCTATTGCTTTTGCGAATAAGATGCAGCTTTTGAAGGATGAGAAGTTTCTTGATGGCAAAATTTTGCCAATGGAAGGGCAATGTAAAATGGCACTCGCTGTTCTTGGCAGTTTATTGTTTCCTTGTGCTGCAGCTGTCCTCATGATGAGTTGTTGGAAGAGTAGAGCTTGCTTAATAGAAATTGATCTTGATTGGGAAGGTAAAGGTCACTCTGATGATTGGATGGATTTACAATATAGATTTAAAAAAGAGGATACGGATCCTCCCTCCCTCGCCTTCTTCTCCTTCCTCTTCCTTACCTCTCACCCGCTATGGACCTCACGATCAACAATCCACTGCAACAAAATCTCAACTTTCACTCTGGAAACCACCGTTGTTGACATGTCGCCGCCGCCGCCACTGGCCAACATCAACGACAACCTTCTCCCCCTTCCCCTCAAACTCCCCACCTTACCGGATCTCTTCCTCACAGCTCTCTCTGTTTGCTTTCTCTTCACGTCCTCTGCTAAGTCCACCGTCTCCCCCAGATGCCCTTTCCTCTCTTTCCCCCTGAACCCTCGTCGCTTTCTTAAAATCCCCGCCATGTCCCACTCTGCATCGGACCATAAGATTAATCTGCTCTCTCGTCGCCACAACTTCGCCTCTCCGCAGTCTCTTTCCGAGTGGCTCAAGACCCGTTTGCCGTCTGATTCCTTCGCCTCCTGGGGTGTGAAGCCCGGCACCAAGAACGTTCACAACCTCTGGCTCGAGCTCTCAGAAGGCGAAACCTCTCTCGCTGATTCCACTCCTCCGGTTCGCACAGTTCAGGTTGTCACGGTTCGAGTCCTCGGCAAAGACGGGAAAATTTTGGTTGAGTCACACCAGGAGTTATCTGACGGTAATGTCAGAAAACGGGGCCGACCCTTGTCGGAGAAGATGAAGCCCAGTGAGGACCCGGAATCGGCTGCCATGAGAGCGATCAAAGAAGAGCTTGGCTCTGTGGTTTTTGGGTCTGAGGCCGATTTGGACGTCTTTGAAATTGTGACGATTGATCCCAATTCGTATGAAATGAAGGTGGAGGAACGGAATTCGGATTCGTATCCGGGGTTGCCTGGTTGTTACGTTTTGCATACCTTGAATGCAACGGTGGAAGGGTTGCCGGAGGGAGATTTTTGTACGTTTGAGGTTGATGAGTATGAACATCTTGACGGAAAAAGTGTTGCTGACAAGGCGGTCTCTGTGAAGAAGCATTACTGGACCTGGGTTAGTGCTGATTCAATGGAATCTTGA 2259 0.4962 MDNSTQESRLRSEHSVTYDSPYPIYAMAFSSTPSLASPLQRIAVGSFIEDYNNRVDIISFNADSSSVRHQPSLSFDHPYPPTKLMFHPNAHSSLRKSSSDLLATSGDYLRLWEVRENSVDAISLLNNSKTSEFCAPLTSFDWNDIEPKRIGTSSIDTTCTIWDIEKGVVETQLIAHDKEVYDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSSKIVILDIRSPTMPVAELERHRACVNAIAWAPQSSRHICSAGDDSQALIWELPTVAGPNGIDPISMYSAGSEINQLQWSAAQPDWIAIAFANKMQLLKDEKFLDGKILPMEGQCKMALAVLGSLLFPCAAAVLMMSCWKSRACLIEIDLDWEGKGHSDDWMDLQYRFKKEDTDPPSLAFFSFLFLTSHPLWTSRSTIHCNKISTFTLETTVVDMSPPPPLANINDNLLPLPLKLPTLPDLFLTALSVCFLFTSSAKSTVSPRCPFLSFPLNPRRFLKIPAMSHSASDHKINLLSRRHNFASPQSLSEWLKTRLPSDSFASWGVKPGTKNVHNLWLELSEGETSLADSTPPVRTVQVVTVRVLGKDGKILVESHQELSDGNVRKRGRPLSEKMKPSEDPESAAMRAIKEELGSVVFGSEADLDVFEIVTIDPNSYEMKVEERNSDSYPGLPGCYVLHTLNATVEGLPEGDFCTFEVDEYEHLDGKSVADKAVSVKKHYWTWVSADSMES 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0183 752 ProSiteProfiles Trp-Asp (WD) repeats profile. 173 213 IPR001680 GO:0005515
Alju08g0183 752 FunFam WD repeat-containing protein LWD1 11 342 - -
Alju08g0183 752 PANTHER WD REPEAT CONTAINING PROTEIN 5 342 IPR045159 -
Alju08g0183 752 SUPERFAMILY WD40 repeat-like 21 302 IPR036322 GO:0005515
Alju08g0183 752 SMART WD40_4 68 113 IPR001680 GO:0005515
Alju08g0183 752 SMART WD40_4 126 163 IPR001680 GO:0005515
Alju08g0183 752 SMART WD40_4 166 204 IPR001680 GO:0005515
Alju08g0183 752 SMART WD40_4 255 295 IPR001680 GO:0005515
Alju08g0183 752 ProSitePatterns Trp-Asp (WD) repeats signature. 282 296 IPR019775 -
Alju08g0183 752 ProSiteProfiles Trp-Asp (WD) repeats profile. 262 296 IPR001680 GO:0005515
Alju08g0183 752 MobiDBLite consensus disorder prediction 623 643 - -
Alju08g0183 752 Gene3D - 4 342 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0183 Alju-ChrAlju08 1405295 1411609 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g0183 08 1405295 1411609 Alju08g0183 08 1405295 1411609 ECH