Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0181 ATGAAGGGCAGTTCAAATATTTCCGGAAGGAGGGCATGCCTTGAGTTCCATGTTTGAGAACTCACAGAGAGTGCTATCCCTATCGATCGCCGTTTCGAAGACGCTATGTCGCCAGGTCCCGTTGTTGAGGCCGCTGCCGATGAGCAGCTTCCATCGGCCGAGGAGATTCAGAACCAGAACCATGAACCCAAGGAGGACGATGCTCCTGTCGTTGAGGATGTGAAGGACGACGACAAGGACGAAGACGACGATGAAGACGACGACGACGACGAGGATGACAAGGAAGATGGTGCTCAAGGTGCTACTGAGGGTTCTAAGCAAAGCAGAAGTGAGAAGAAGAGTCGGAAAGCCATGTTGAAGCTGGGACTGAAGCCTGTTACGGGTGTTAGCAGGGTCACAATCAAGAGAACGAAAAATATTCTCTTTTTCATCTCAAAGCCCGATGTCTTCAAGAGTCCAAACTCAGACACCTATGTGATATTTGGGGAAGCCAAAATAGAGGATTTGAGCTCACAGTTGCAGACACAAGCTGCTCAGCAGTTCAGGATGCCAGATATGGGATCAGTGGTGGCAAAACCAGATGCTGCTGCGGCAGCAACTGTAGGAGCACCGCCTGATGAGGAAGAAGAGGAGGTTGATGAAACGGGAGTGGAGCCTCGTGACATCGACTTGGTGATGACGCAGGCCGGAGTGTCCAGAAGCAAGGCCGTTAAGGCTCTCAAGACTCACAGCGGAGACATTGTTGGTGCTATCATGGAACTCACTACTTAA 771 0.5097 MKGSSNISGRRACLEFHVXELTESAIPIDRRFEDAMSPGPVVEAAADEQLPSAEEIQNQNHEPKEDDAPVVEDVKDDDKDEDDDEDDDDDEDDKEDGAQGATEGSKQSRSEKKSRKAMLKLGLKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSDTYVIFGEAKIEDLSSQLQTQAAQQFRMPDMGSVVAKPDAAAAATVGAPPDEEEEEVDETGVEPRDIDLVMTQAGVSRSKAVKALKTHSGDIVGAIMELTT 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0181 256 CDD UBA_NAC_euk 219 255 - -
Alju08g0181 256 FunFam Putative nascent polypeptide-associated complex subunit alpha 217 254 - -
Alju08g0181 256 MobiDBLite consensus disorder prediction 22 117 - -
Alju08g0181 256 FunFam Nascent polypeptide-associated complex (NAC), alpha subunit 118 170 - -
Alju08g0181 256 Gene3D - 117 170 IPR038187 -
Alju08g0181 256 Pfam HYPK UBA domain 216 255 IPR044034 -
Alju08g0181 256 ProSiteProfiles NAC A/B domain profile. 108 173 IPR002715 -
Alju08g0181 256 MobiDBLite consensus disorder prediction 71 97 - -
Alju08g0181 256 Gene3D - 217 254 - -
Alju08g0181 256 CDD NAC_NACA 122 169 - -
Alju08g0181 256 Pfam NAC domain 111 166 IPR002715 -
Alju08g0181 256 PANTHER NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED 51 255 IPR016641 GO:0005854
Alju08g0181 256 SMART NAC_2 111 167 IPR002715 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0181 Alju-ChrAlju08 1373870 1376383 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g0181 08 1373870 1376383 Alju08g0181 08 1373870 1376383 ECH