Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0176 ATGGGTGAAGAAGCTAAACAGGAACAAGCTAAGGCAGAGGAGAAGAAGGAAGAGAAAACAGAGGAAAAACCAGGGGAAGAGAAGAAAGAAGAGAAAGCGGAGGAAAAGCCGGCGGAGGAGAAGAAGGAAGAGCCTAAGCCACCATCACCATGCGTGCTTTCTGTGGACTTGCATTGTGTGGGATGCGCCAAGAAAATTGAGAGATGTATTATGAAAATGCGAGGAGTTGAAGGGGTGGTCATTGATATGGCTAAAAATGAAATAACCATAAAAGGGATAGTTGAACCCCAAGCAATCTGTGATAAGATTACCAAGAGAACAAGGAGAAGAGCCAAAGTCATTTCTCCATTGCCCGCAGCAGAAGGAGAACCAGTCCCTGAAGTTGTTACTTCTCAGGTTAGTGGACCAGTAACCGTGGAACTTAATGTGAACATGCACTGTGAGGCGTGTGCTGAGCAACTCAAGAGGAAAATTCTCAAAATGAGAGGAGTGCAAACAGCAGAGACAGAATTGAGCACGGGGAAGGTTACTGTAACAGGGACAATGGATGCGAACAAGCTAGTGGACTATGTGTACAGACGCACCAAAAAGCAAGCGAAGATAGTTCCACAACCAGAGCCTGAACCAGAGAAGAAGGAAGAACCTAAAGAAGCAGAGAAACCAGCAGAGGAGGCAAAAACTGAAGAGAAGAAGGAAGAGAACACAAAGAAGAAAGAAGAAGAGAAACCTGCAGCAGAAGAGCCCAAGAAGGAAGAGGAAGGTAATAAAGGAGGTGAAGATAAGGGTGAGAATAAAGAAGAAAAAGGAGGTGAAGAAAGCAAGGAAGAGGCCAAGAAAGGAGTAGTAGATCAGAATAATAATGGGATGGTGGTGATTGATGATGAAGGAATAAAGAGGATGATGTATTATTATCAGCAGCCACTGTATATGATTGAACGAATCCCTCCTCCTCAGCTCTTCAGCGATGAAAACCCCAATGCATGCTGCATTTCATAA 996 0.4428 MGEEAKQEQAKAEEKKEEKTEEKPGEEKKEEKAEEKPAEEKKEEPKPPSPCVLSVDLHCVGCAKKIERCIMKMRGVEGVVIDMAKNEITIKGIVEPQAICDKITKRTRRRAKVISPLPAAEGEPVPEVVTSQVSGPVTVELNVNMHCEACAEQLKRKILKMRGVQTAETELSTGKVTVTGTMDANKLVDYVYRRTKKQAKIVPQPEPEPEKKEEPKEAEKPAEEAKTEEKKEENTKKKEEEKPAAEEPKKEEEGNKGGEDKGENKEEKGGEESKEEAKKGVVDQNNNGMVVIDDEGIKRMMYYYQQPLYMIERIPPPQLFSDENPNACCIS 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0176 331 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 9 1 331 IPR044258 GO:0046872
Alju08g0176 331 MobiDBLite consensus disorder prediction 1 47 - -
Alju08g0176 331 MobiDBLite consensus disorder prediction 198 281 - -
Alju08g0176 331 ProSiteProfiles Heavy-metal-associated domain profile. 136 200 IPR006121 GO:0046872
Alju08g0176 331 MobiDBLite consensus disorder prediction 1 49 - -
Alju08g0176 331 SUPERFAMILY HMA, heavy metal-associated domain 133 197 IPR036163 GO:0046872
Alju08g0176 331 Coils Coil 222 242 - -
Alju08g0176 331 SUPERFAMILY HMA, heavy metal-associated domain 53 106 IPR036163 GO:0046872
Alju08g0176 331 Pfam Heavy-metal-associated domain 142 188 IPR006121 GO:0046872
Alju08g0176 331 Pfam Heavy-metal-associated domain 53 102 IPR006121 GO:0046872
Alju08g0176 331 ProSiteProfiles Heavy-metal-associated domain profile. 48 111 IPR006121 GO:0046872
Alju08g0176 331 CDD HMA 140 180 IPR006121 GO:0046872
Alju08g0176 331 Gene3D - 49 111 - -
Alju08g0176 331 Gene3D - 135 201 - -
Alju08g0176 331 CDD HMA 52 105 IPR006121 GO:0046872
Alju08g0176 331 Coils Coil 2 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0176 Alju-ChrAlju08 1345399 1347182 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g1706 07 43303559 43305624 Alju08g0176 08 1345399 1347182 CCT
Alju08g0176 08 1345399 1347182 Alju08g0176 08 1345399 1347182 ECH