Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0161 ATGGCATTCTGGAAGCTCCCCACTTTGGTCCTCCTCCTCTTCGCATTCTCAACCTGTTCAAACGGCGCCATCACATTCACCATCACCAACAACTGCAGCAGCACTATATGGCCCGGCACAGCGGCGGGTTCAGGGACGGCGCAGCTTTCGCAGACGGGTTTCCGGCTGGAGGCAGGGCGAAGTGTGAAGTTGATGACAAGCGGGGCGAAATGGTCGGGGAGGATATGGGGAAGGACGGGGTGCAAGTTTGATGGGAATGGAGAGGGCAAGTGCGAAACAGGTGATTGTGGTGGGAAGCTGGAATGTGAAGGGAATGGAGCAGCTCCTCCGGTGTCGTTGTTCGAGATAACACTTGGCAGCGGCACTGACCAAGACTTCTACGATGTCAGCCTCGTCGACGGCTACAATCTCCCAATGCTTGCCGTGCCGGCAGACGTCTATGGCACCTCTGCCTGTAATTCCACCGGTTGTATTTCTAATCTCAACACAGGTTGCCCAAAAGAACTTCAAATGAGGAGTGGAAATGGGAAGCAGGGAAGTGGGGGCGTAATTGGGTGCAGGAGCGCTTGCGAGGCATTTGATACGGACCAGTACTGCTGCAGAGGACAAAATGCGAGCCCAGCCACATGCCCTCCCTCTCACTACTCAACCATGTTCAAGAAGGCGTGTCCCAGAGCTTACAGTTACGCTTATGATGATGCCACCAGCACCTTCACTTGCAAAGCTTACGGCTATCACATCATCTTCTGCCCCTTCACCTCCTCCAGGTACTACTCTCTCCCTCTAAACTCTCAGCACAACCTTCCCCTTTAA 813 0.5424 MAFWKLPTLVLLLFAFSTCSNGAITFTITNNCSSTIWPGTAAGSGTAQLSQTGFRLEAGRSVKLMTSGAKWSGRIWGRTGCKFDGNGEGKCETGDCGGKLECEGNGAAPPVSLFEITLGSGTDQDFYDVSLVDGYNLPMLAVPADVYGTSACNSTGCISNLNTGCPKELQMRSGNGKQGSGGVIGCRSACEAFDTDQYCCRGQNASPATCPPSHYSTMFKKACPRAYSYAYDDATSTFTCKAYGYHIIFCPFTSSRYYSLPLNSQHNLPL 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0161 270 FunFam THAUMATIN-LIKE PROTEIN 1 24 251 - -
Alju08g0161 270 SMART tha2 26 251 IPR001938 -
Alju08g0161 270 CDD TLP-PA 25 250 - -
Alju08g0161 270 PANTHER OS03G0233200 PROTEIN 12 251 IPR001938 -
Alju08g0161 270 PIRSF PR5 1 268 IPR001938 -
Alju08g0161 270 SUPERFAMILY Osmotin, thaumatin-like protein 25 251 IPR037176 -
Alju08g0161 270 ProSiteProfiles Thaumatin family profile. 23 251 IPR001938 -
Alju08g0161 270 ProSitePatterns Thaumatin family signature. 87 102 IPR017949 -
Alju08g0161 270 PRINTS Pathogenesis-related protein signature 74 85 IPR001938 -
Alju08g0161 270 PRINTS Pathogenesis-related protein signature 125 141 IPR001938 -
Alju08g0161 270 PRINTS Pathogenesis-related protein signature 87 116 IPR001938 -
Alju08g0161 270 PRINTS Pathogenesis-related protein signature 25 37 IPR001938 -
Alju08g0161 270 Gene3D Thaumatin 24 251 IPR037176 -
Alju08g0161 270 Pfam Thaumatin family 30 251 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0161 Alju-ChrAlju08 1259662 1260632 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0161 4 251 Receptor kinase-like Gene Family AT5G38280 42.400 1.41e-63 209
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g0161 08 1259662 1260632 Alju08g0161 08 1259662 1260632 ECH