Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2700 ATGATAAAACCGAATCATAGAAAAGCAAAGGACAATATATTTACATGTTGCGCCGTATGCCAAAGAGCCAAAACCAAAGGCCAAAGCGGAGACCAGAGAGCACTCACTGGGAGAGATCCCTTCTCTCTCTCTCTCTGCCCCCTCTTCCCAATTCCACACACCCTTTGCGCCAATCAACGACCCCACAATCAAATTTCCCTCCCTCCCTCCCTCCCTCCCTCTCTTAAACCTCTCCTTCTTACCATGCCAGCTTCCCCTTCTGACAACCGAACCAAATGGCGGAAGCGCAAGAGAGAACCCCAAATCAGCCGGCGGCAACAGAAGCACGAGGACGAGGAGGACGACGACGATGACCCCAATGGCGAGGACGACCACCTCGAGCGACAGGATGATTCCGAGGACCAAACCCAACACCCTAATCCCCAATCCGGTTCTAATTCTCAAGCGCAGCTCGAGATCGAGGTTTTGTCCGACGATGGAGTCCAAATTTCTCAGTTCCCTAGAGTGATCAAGCGCACTGTCAATCGCCCTCACGCATCCGTCACAGCAATTGTCGCTCTGGAGCGTGCCAATGAGTCTGGAGACAACAAGGGCCAGTTGCAGAATTCTCCATTTTTGGAGAATGTGTCACACGGGCAGCTTCAGGCGCTTTCCACCGTGCCCGCCGATAGTTCAGCTTTGGATCAGGACCGTAATTCGGCTTATGTGATCACCCCACCTCCCGTACTGGAAGGCCGTGGTGTTGTCAAGCGGTTTGGGAGTAGGGTTCTGGTAGTTCCAATGCATTCAGAATGGTTTTCACCAGCTACAGTGCATCGGCTTGAGAGACAAGTGGTGCCACGTTTTTTCTCCGGAAAATCACCGGATCATACCCCAGAGAAGTACATGGAATGTAGAAATTATATAGTTGCAAGATACATGGAAGACCTGGGGAAGAGGATTACAATTTCTGATTGCCAAGGATTGTTAGTTGGGGTTGATAATGAAGATTTAACTCGAATTTTCCGGTTTCTCGATCATTGGGGAATCATCAACTACTGTGCTCAGGTACCAAGTCATGAGGCTCGGAATGATGAGTGTTACCTGAAGGATGAGGCAAGCGGTGAGATTCGTGTGCCATCAGATGCCTTAAAATCTATAGATGGTTTGATCAAATTCGACAGGCCGAAGTGTAAACTCAAAGCAGATGAAGTTTATTCTTCATTGACGACTCAGAATGCTGGTATTTCTGATTTGGAGGAAAGAATAAGAGAGCATCTATCTGAAAATCATTGCAATTGTTGTTCTCGTTCTCTTCCTGCTGTTTTCTATCAGTCACAAAAAGAGGCTGATATTCTTCTCTGCATTGATTGTTTCCATGATGGGAGATTTGTCGCCGGTCATTCAAGTATAGATTTTATAAGAGTTGATTCAACAAGAGATTATGGTGATCTAGATGGGGATAGTTGGACTGATCAAGAAACCTTGCTGCTGCTTGAGGCAATGGAGATTTACAATGAGAATTGGAATGAAATTGCTGAGCATGTTGGTACCAAGTCAAAAGCACAATGTATTCTCCATTTTCTCCGTCTACCCATGGAAGATGGAAAATTGGAAAATATCAATGTTCCTAGAATGTCATTGTCATCAAATATGTCACATGGCAATGATTGTGAAAGACCGCATTCAAATTTTGATGCAGATTTAGCAGGACCGACTCAGAGCATTGATCCCAACAGCAGGCTCCCTTTTTCAAATTCTGAAAATCCTGTTATGGCTCTGGTTGCCTTTTTGGCCTCTGCTATTGGACCTAGAGTAGCTGCTGCTTGTGCACATGCAGCATTAGCAGAATTGTCAGAGAATAATTCTGGTAGTATGTCACAGAAGGAAGCACCCGGGCTTAGTAACAGGATGAACTTGGAAGGCACACATAGTAAAGATGGCGGTCTTCTTGGAGAAGTTGCAAACCCAAATCAGCAAGATGAGGACGAGGCAAAAGCCCTTGGTTCACAGGGTCCAAATGAGGGTGAGGCCATCCCTCTATCTGCTGAGAAAGTTAAAGATGCTGCTAAGGCAGGCTTGTCTGCTGCAGCAATGAAAGCTAAACTGTTTGCAGATCATGAAGAAAGAGAAATTCAGAGGCATTGTGCTAATATTATAAACCATCAGCTGAAAAGATTGGAATTGAAGCTCAAGCAGTTTGCTGAAATTGAAACGCAATTGATGAAAGAATGTGACCAAATGGAGAAGACAAGACAAAGGCTTGCTGCGGAACGTTCCCGTCTTTTATCATCATGGCTTGGATCTAGTGTAGCCACAAACACACCCGGTGTTGGTCCTTCCACAGTCAGCAACAATAATGGCAACAGTAGACCACAAATGGCCTTTGGATCTCCTTCACAGCCTAGTGTCTCAGGGTACCCAAGTGGCCAACCAGTTCATCCACACATGTCCTTTGTCCCACGGCCTTCCATGTTTGGTGGGTTAGGGCAAAGACTGCCACTGTCTATGATACAACAACCACAATCAACTTCACCAAATCCCATGTTTAAAGTCCCTGGTAATGTGCAGCCTTCTACCAATCATCCATTGTTGAGGCCTGTATCAGGTACTAACTCTGGTTTAGGTTAA 2610 0.4594 MIKPNHRKAKDNIFTCCAVCQRAKTKGQSGDQRALTGRDPFSLSLCPLFPIPHTLCANQRPHNQISLPPSLPPSLKPLLLTMPASPSDNRTKWRKRKREPQISRRQQKHEDEEDDDDDPNGEDDHLERQDDSEDQTQHPNPQSGSNSQAQLEIEVLSDDGVQISQFPRVIKRTVNRPHASVTAIVALERANESGDNKGQLQNSPFLENVSHGQLQALSTVPADSSALDQDRNSAYVITPPPVLEGRGVVKRFGSRVLVVPMHSEWFSPATVHRLERQVVPRFFSGKSPDHTPEKYMECRNYIVARYMEDLGKRITISDCQGLLVGVDNEDLTRIFRFLDHWGIINYCAQVPSHEARNDECYLKDEASGEIRVPSDALKSIDGLIKFDRPKCKLKADEVYSSLTTQNAGISDLEERIREHLSENHCNCCSRSLPAVFYQSQKEADILLCIDCFHDGRFVAGHSSIDFIRVDSTRDYGDLDGDSWTDQETLLLLEAMEIYNENWNEIAEHVGTKSKAQCILHFLRLPMEDGKLENINVPRMSLSSNMSHGNDCERPHSNFDADLAGPTQSIDPNSRLPFSNSENPVMALVAFLASAIGPRVAAACAHAALAELSENNSGSMSQKEAPGLSNRMNLEGTHSKDGGLLGEVANPNQQDEDEAKALGSQGPNEGEAIPLSAEKVKDAAKAGLSAAAMKAKLFADHEEREIQRHCANIINHQLKRLELKLKQFAEIETQLMKECDQMEKTRQRLAAERSRLLSSWLGSSVATNTPGVGPSTVSNNNGNSRPQMAFGSPSQPSVSGYPSGQPVHPHMSFVPRPSMFGGLGQRLPLSMIQQPQSTSPNPMFKVPGNVQPSTNHPLLRPVSGTNSGLG 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2700 869 PANTHER SWI/SNF COMPLEX-RELATED 150 755 - -
Alju07g2700 869 CDD SANT 482 524 IPR001005 -
Alju07g2700 869 ProSiteProfiles SANT domain profile. 478 529 IPR017884 -
Alju07g2700 869 Pfam SWIRM domain 260 346 IPR007526 GO:0005515
Alju07g2700 869 Gene3D - 479 529 - -
Alju07g2700 869 MobiDBLite consensus disorder prediction 832 869 - -
Alju07g2700 869 Gene3D - 263 350 IPR036388 -
Alju07g2700 869 ProSiteProfiles Myb-like domain profile. 475 525 IPR001005 -
Alju07g2700 869 FunFam SWI/SNF complex subunit SMARCC2 isoform C 479 529 - -
Alju07g2700 869 SUPERFAMILY Homeodomain-like 480 533 IPR009057 -
Alju07g2700 869 MobiDBLite consensus disorder prediction 67 147 - -
Alju07g2700 869 MobiDBLite consensus disorder prediction 612 649 - -
Alju07g2700 869 Pfam Myb-like DNA-binding domain 482 524 IPR001005 -
Alju07g2700 869 MobiDBLite consensus disorder prediction 766 804 - -
Alju07g2700 869 MobiDBLite consensus disorder prediction 112 129 - -
Alju07g2700 869 SUPERFAMILY Homeodomain-like 256 348 IPR009057 -
Alju07g2700 869 SMART sant 479 527 IPR001005 -
Alju07g2700 869 MobiDBLite consensus disorder prediction 612 635 - -
Alju07g2700 869 ProSiteProfiles Zinc finger ZZ-type profile. 419 474 IPR000433 GO:0008270
Alju07g2700 869 Pfam SWIRM-associated region 1 685 756 IPR032451 -
Alju07g2700 869 ProSiteProfiles SWIRM domain profile. 257 355 IPR007526 GO:0005515
Alju07g2700 869 MobiDBLite consensus disorder prediction 766 801 - -
Alju07g2700 869 FunFam SWI/SNF complex subunit SMARCC2 isoform c 263 351 - -
Alju07g2700 869 Coils Coil 717 751 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2700 Alju-ChrAlju07 52528916 52535093 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2700 425 521 EF-hand Containing Proteins AT3G07740 33.019 4.88e-10 61.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g2700 07 52528916 52535093 Alju07g2700 07 52528916 52535093 ECH