LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju07g2695	ATGGTGGTGATGATGGACGTGAAATGCAGGGGAATCGCAACGACTCTCATATTCTTTCTGGGATTTTCTGCTATTCTCCCCCTCTGTTTCTCCGATGTCAATCTGCCCAGTCTCACCAAGAAGAAGCCACAACCATTAATTTCTAATAATCGCATTGGCTCCTCCGTTGTTTTACCGGTTCAAGGGAACGTGTATCCCCTCGGGTATTACTCAGTTTCCCTGAACATTGGCAATCCCCCAAAAGCTTACGACCTTGACATTGACTCAGGCAGCGACCTCACCTGGGTACAGTGCAACGCACCGTGTAAAGGTTGCACCAAGCCTCCGAGTCAGCAGTATAAGCCGAACAAGAACCTTGTTCCTTGTGGGGACCCGTTGTGTGGTGGAGTTCAGTCATCGCCGAGCCATCACTGTCAATCCCCCAATGACCAATGCGACTATGAGGTTGAGTATGCAGACCACGGCTCATCAATGGGTGTGCTGGTCCGAGACTTTGTTCCTCTCCGGCTCACCAATGGGTCGGTTCTCGGTCCCCGGGTGGCTTTCGGGTGTGGGTACGATCAAACCTATTCTGGTCCAACATCGCCACCATCTACTGCAGGAGTGCTAGGTCTTGGAAATGGCAAGTCAGGTCTTTTGTCACAGCTTACATCTATGGGTCTCATTCGTAATGTGGTGGGCCACTGTCTAAGTGGTCGTGGCGGAGGTTTTTTATTTTTTGGAGATCATCTCGTTCCCTCCTCTGGGGTTTCTTGGACCCCAATCTTGCCTGGTTCGTCTATAAAACACTACGTCTCTGGACCAGCGAATCTGCTTTTCAACGCAAAGCCAACTTCTGTGACGGGCGTTCAGGTTATCTTTGACAGTGGAAGCTCCTACACATACTTCAATTCCAATGCTTATCAAGCCATTGTTAATACGATAGTTGATGATCTGAAGGGGAAGCAACTGAGCAGAGCAACAGCAGATCCGTCCCTTCCAGTTTGCTGGAAAGGTACAAAGCCATTCAAATCTTTAAGAGATGTGGCCAACTTTTTTAGGCCCTTAACACTGAGCTTCACAAGGACAAAGAACGTACAGCTGCAATTGCCACCATCATCTTATCTCATTCTTACTAAATATGGCAATGTCTGCTTGGGAATTCTTAATGGCTCTGGAGCTGGACTGGGAAATCTTAACATCATTGGAGACATATTTTTACAAGATAAACTGGTGATTTATGACAACGAGAAAAGGCAGATTGGATGGATTCCCGCAAACTGTGATAGGCTTCCCAAGTGA	1281	0.477	MVVMMDVKCRGIATTLIFFLGFSAILPLCFSDVNLPSLTKKKPQPLISNNRIGSSVVLPVQGNVYPLGYYSVSLNIGNPPKAYDLDIDSGSDLTWVQCNAPCKGCTKPPSQQYKPNKNLVPCGDPLCGGVQSSPSHHCQSPNDQCDYEVEYADHGSSMGVLVRDFVPLRLTNGSVLGPRVAFGCGYDQTYSGPTSPPSTAGVLGLGNGKSGLLSQLTSMGLIRNVVGHCLSGRGGGFLFFGDHLVPSSGVSWTPILPGSSIKHYVSGPANLLFNAKPTSVTGVQVIFDSGSSYTYFNSNAYQAIVNTIVDDLKGKQLSRATADPSLPVCWKGTKPFKSLRDVANFFRPLTLSFTRTKNVQLQLPPSSYLILTKYGNVCLGILNGSGAGLGNLNIIGDIFLQDKLVIYDNEKRQIGWIPANCDRLPK	426

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju07g2695	426	Gene3D	Acid Proteases	48	242	IPR021109	-
	Alju07g2695	426	PRINTS	Pepsin (A1) aspartic protease family signature	285	296	IPR001461	GO:0004190\|GO:0006508
	Alju07g2695	426	PRINTS	Pepsin (A1) aspartic protease family signature	393	408	IPR001461	GO:0004190\|GO:0006508
	Alju07g2695	426	PRINTS	Pepsin (A1) aspartic protease family signature	76	96	IPR001461	GO:0004190\|GO:0006508
	Alju07g2695	426	FunFam	Aspartyl protease family protein	47	242	-	-
	Alju07g2695	426	ProSitePatterns	Eukaryotic and viral aspartyl proteases active site.	85	96	IPR001969	GO:0004190\|GO:0006508
	Alju07g2695	426	Pfam	Xylanase inhibitor C-terminal	282	416	IPR032799	-
	Alju07g2695	426	ProSiteProfiles	Peptidase family A1 domain profile.	70	417	IPR033121	-
	Alju07g2695	426	FunFam	Aspartic proteinase Asp1 isoform A	246	425	-	-
	Alju07g2695	426	Pfam	Xylanase inhibitor N-terminal	70	242	IPR032861	-
	Alju07g2695	426	SUPERFAMILY	Acid proteases	62	424	IPR021109	-
	Alju07g2695	426	PANTHER	ASPARTYL PROTEASES	59	415	IPR001461	GO:0004190\|GO:0006508
	Alju07g2695	426	Gene3D	Acid Proteases	248	424	IPR021109	-
	Alju07g2695	426	ProSitePatterns	Eukaryotic and viral aspartyl proteases active site.	285	296	IPR001969	GO:0004190\|GO:0006508

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju07g2695	Alju-ChrAlju07	52466388	52468506	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju07g2695	54	426	Miscellaneous Gene Families	AT1G44130	62.032	1.89e-173	489

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Alju07g2695	07	52466388	52468506	Alju07g2695	07	52466388	52468506	ECH