Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2618 ATGCCCTGCCACATGATGGCTGCTTCCATCTGCATACCCCGTGCTGTTTCAGCACAGCCCGCCACAACTTTTCCCAGTTGGAAGTCTTTCAGAGAGAGGAAAACTGATCTGCAGCCAGGAATCCCTCGCAGCGTTCATATGGAGAACCTGCAGAACGAATACTTGTTTCCTGAGATATTCATGCGGGAATCTGAACATGCCCGGAAGAATCCACATGCGAAAGTAATTAGGCTTGGTATTGGTGATACCACAGAACCAATTCCAAATATCATAACTTCTGCTATGGTTGAGAAAGCACTTGCTTTGTCAACAGTTGACGGTTACACTGGATATGGACTAGAACAAGGAAACTGGGAATTAAGGAAGGCAATAGCTGAAAGACTCTACCGGAATTCATGCGTGAAGGAGAATGAGGTTTTCGTCTCCGACGGTGCACAGTGCGACATCTCACGCATACAGATGCTTCTATCAGCTAATTTGACGGTGGCTGTGCAGGACCCAACTTTTCCGGCGTATGTAGATTCAAGTGTAATTATGGGCAGAGCAGGCAGGTTCCAAGCAGAAACCCAGAAATACAGGAACATAGTGTACATGAAGTGTGTACCAGAGAACAATTTCTTCCCAGACTTATCATCAACTCCAAGGGCTGATGTTATCTTCTTCTGTTCTCCTAACAATCCGACCGGTAACGCAGCAACAAGGAAGCAGCTAAAGCAACTGGTGGATTTTGCAAAAGCAAACGGATCCATAATCATATATGACTCAGCATATGCTGCTTTCATATCTGATGAAAGCCCAAGATCAATATTTGAAATCCCAGGAGCCAAAGAGGTGGCAATTGAAATCTCATCATTCTCCAAATTTGCTGGTTTCACTGGGGTCCGCCTAGGCTGGACGGTGGTCCCCGAGCAATTATTGTACTCGAATGGATATCCTGTGATCAAAGATTATAATCGCCTAGTGTGCACCAGCTTTAATGGTGCATCAAATATTGTTCAAGCTGGGGGACTTGCTTGCCTTTCTGATGAAGGTCTTGAGGCATTGAGGAAGAATGTGAATTATTACAAGGAGAATGCGAAAATTATGGTGGACACGTTTGAATCACTAGGGCTGAAGGTGTACGGAGGCAAAAACGCACCTTACGTCTGGGTGCATTTTCCGGGGAGAAAATCGTGGGACGTGTTCAACAAGATTCTACAGAGAACGGACATAGTCACCGTCCCGGGGATAGGATTTGGACCCGGCGGCGAGGGGTTTATTAGAGTTAGTGCATTTGGTCGTAGAGACAAGATACTGGAAGCTTCAACGAGGCTGAGAAATTTTCTTTAG 1329 0.4575 MPCHMMAASICIPRAVSAQPATTFPSWKSFRERKTDLQPGIPRSVHMENLQNEYLFPEIFMRESEHARKNPHAKVIRLGIGDTTEPIPNIITSAMVEKALALSTVDGYTGYGLEQGNWELRKAIAERLYRNSCVKENEVFVSDGAQCDISRIQMLLSANLTVAVQDPTFPAYVDSSVIMGRAGRFQAETQKYRNIVYMKCVPENNFFPDLSSTPRADVIFFCSPNNPTGNAATRKQLKQLVDFAKANGSIIIYDSAYAAFISDESPRSIFEIPGAKEVAIEISSFSKFAGFTGVRLGWTVVPEQLLYSNGYPVIKDYNRLVCTSFNGASNIVQAGGLACLSDEGLEALRKNVNYYKENAKIMVDTFESLGLKVYGGKNAPYVWVHFPGRKSWDVFNKILQRTDIVTVPGIGFGPGGEGFIRVSAFGRRDKILEASTRLRNFL 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2618 442 CDD AAT_like 76 439 - -
Alju07g2618 442 NCBIfam LL-diaminopimelate aminotransferase 44 440 IPR019942 GO:0008483
Alju07g2618 442 Gene3D - 85 342 IPR015421 GO:0003824
Alju07g2618 442 FunFam LL-diaminopimelate aminotransferase, chloroplastic 85 342 - -
Alju07g2618 442 Hamap LL-diaminopimelate aminotransferase [dapL]. 42 441 IPR019942 GO:0008483
Alju07g2618 442 Pfam Aminotransferase class I and II 74 424 IPR004839 GO:0009058|GO:0030170
Alju07g2618 442 SUPERFAMILY PLP-dependent transferases 53 438 IPR015424 -
Alju07g2618 442 Gene3D Aspartate Aminotransferase, domain 1 55 438 IPR015422 GO:0003824
Alju07g2618 442 PANTHER AMINOTRANSFERASE 30 441 IPR019942 GO:0008483
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2618 Alju-ChrAlju07 51746958 51750225 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g2618 07 51746958 51750225 Alju07g2618 07 51746958 51750225 ECH