Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2614 ATGGGTTCTTTTTTTAGTATGGCGAATACCAAATTCGATAGAAGTGAGGATGATGAGGTCTTTCAGAATGAGACCTGCAAGAGGAGAAGAATGTCATCTAGCTTTGATGAGGAGAATCCAAGATTAATTCCAAATCTTCCTGACGAGTTATCACTTCAGATTATCGCCAGAGTTCCTAGAATTTGCTACTTCAACATGAGGTTGGTGTCAAGGAAGTGGAAGGCTACTATCATCAGTTCTGAACTATATAAATTAAGAAAAGAACTTGGAACAACTGAAGAGTGGTTATATCTGTTGATCAAGGTTGGAGAAAATAAGCTTATATGGCATGCCTTAGACCCTCGTTCCCAGAAATGGCAGAGACTGCCTGCTATGCCCAGTTTTGTTAATGAAGAAGAATCTAGAAAGGGTTCATCTAGGCTTTGGATGTGGAACATGGTGGAAGGTATTAGAATTGCTGAAGTTATAAGAGGTTTGCTGGGACAGAAGGATGCATTAGATGAAATGCCCTTTTACGGTTGTGCCATTGGAGCTGTTGAGGGCTGCCTCTATGTTCTAGGTGGATTCTCTAAATCTTCAACGATGAGATGTGTTTGGCGATACGATCTGATACAAAACACATGGATCAAGGTGACCTCTATGTCTACAGGTAGAGCATATTGCAAGACAGGCATCTTAAATAACAAGCTTTATGTGGTTGGAGGGGTTAGTCAGGATCAAGCTGGATTGATTCCTCTTCAGTCTGCTGAAGTTTTTGATCCCTCTACAGATACATGGTCCAATGTACCTAGTATGCCTTTCTCAAAAGCTCGAGTCCTGCCCACTGCTTTTTTGGCTGACATGCTGAAGCCTATTGCCACAGGGTTGACCTCGTACATGGGAAGGCTATGTGTTCCACAAAGTCTGTATTCATGGCCCTTTTTCGTTGATGTAGGCGGAGAAATCTATGATCCTGAAACAAATTCATGGATGGAAATGCCTACAGGGATGGGTGAGGGTTGGCCTGCTCGGCAAGCAGGTACCAAATTGAGTGTTGTGGTGGATGGTGAATTATATGCTTTTGATCCATCTAATTCTCTGGAAAGTGGAAAGATCAAGGTATATGATCAAGGAGAAGATGCATGGAAAGTAGCTATAGGAAAAGTCCCTGTATATGATTCTGCAGATTCAGAGTCTCCATATTTGCTCTCTGGTTTCCATGGGAAAATTCATGTCATAACAAAAGATGCCAATCATGACATTGCTGTTCTTAAGGCTGACCTGCGCAGTAATTTGGATTCTTCTCCTTCAATTTCATCTCTTTCACCCATCTGTAGCCATGAAGTTCCAGAGTCAGGTGTTGAATCTGATGCAGTTGTTTGGAGGGTAGTCGCCAAGAGGGATTTTGGGCCAGCTGAATTGGTCAGTTGCCAAGTGATTGATATTTAG 1428 0.423 MGSFFSMANTKFDRSEDDEVFQNETCKRRRMSSSFDEENPRLIPNLPDELSLQIIARVPRICYFNMRLVSRKWKATIISSELYKLRKELGTTEEWLYLLIKVGENKLIWHALDPRSQKWQRLPAMPSFVNEEESRKGSSRLWMWNMVEGIRIAEVIRGLLGQKDALDEMPFYGCAIGAVEGCLYVLGGFSKSSTMRCVWRYDLIQNTWIKVTSMSTGRAYCKTGILNNKLYVVGGVSQDQAGLIPLQSAEVFDPSTDTWSNVPSMPFSKARVLPTAFLADMLKPIATGLTSYMGRLCVPQSLYSWPFFVDVGGEIYDPETNSWMEMPTGMGEGWPARQAGTKLSVVVDGELYAFDPSNSLESGKIKVYDQGEDAWKVAIGKVPVYDSADSESPYLLSGFHGKIHVITKDANHDIAVLKADLRSNLDSSPSISSLSPICSHEVPESGVESDAVVWRVVAKRDFGPAELVSCQVIDI 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2614 475 ProSiteProfiles F-box domain profile. 40 86 IPR001810 GO:0005515
Alju07g2614 475 SUPERFAMILY F-box domain 40 107 IPR036047 GO:0005515
Alju07g2614 475 SMART kelc_smart 229 279 IPR006652 GO:0005515
Alju07g2614 475 SMART kelc_smart 182 228 IPR006652 GO:0005515
Alju07g2614 475 SUPERFAMILY Kelch motif 98 378 IPR015915 GO:0005515
Alju07g2614 475 PANTHER OS02G0202900 PROTEIN 23 473 IPR045887 -
Alju07g2614 475 SMART fbox_2 46 86 IPR001810 GO:0005515
Alju07g2614 475 Pfam Kelch motif 218 266 IPR006652 GO:0005515
Alju07g2614 475 Pfam Kelch motif 170 215 IPR006652 GO:0005515
Alju07g2614 475 CDD F-box_AtAFR-like 42 86 - -
Alju07g2614 475 Gene3D - 84 383 IPR015915 GO:0005515
Alju07g2614 475 Pfam F-box domain 44 83 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2614 Alju-ChrAlju07 51695793 51697220 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2614 46 270 Miscellaneous Gene Families AT4G33900 25.417 1.22e-10 61.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g2614 07 51695793 51697220 Alju07g2614 07 51695793 51697220 ECH