Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2583 ATGTTCAACAACACATCAGAGAAAAATAAGAGCAACGCAGAGAACAACAACATGAAGAGAGATGAAGTGTTGGACACGTGGTGGAATGGATTTCAAAACACATCATATCCCAATCTTCATCATGTCCATCCTTACAATGAGCATTTGGCGATTAACTCCCCTCTATGGAAGGTCTCTCACTCATCACATTCTCCTCCGTCAACTTCTTTCGCTGACGGGCTTCATGTTTCTCCCCGTAGTTCCTCATACTCAGCTTCATTTCAGGACAGGCAGCATCTAACACCCTACGATCACCACTCAACTAATTTTTTGCTGGACTCCGAGACATCGGGTTTCCATATTGGGAAGAGCATCGTTGATAATCAAGTGGTTGATCTGGACCTGTCTCAGGATTTCTATAGAATGAATATTATAGATGGACAGGGAAATGGTAACAGAACAAAGGCACCTGAAGCGGATTCCTACGGATTTGGATTTGACGCTTTTCCTTTCGATATAAATATTCCCGGCGTTAGTGAAACACGGAGCTCCTATGAAGATTTTTGCAATGAAGTTCCCGCACCTAATAATGGGTGTATCCCATCGTCTACTTGGGGAGTTTCGCCAAGTATGGTTGCTAGTATGAAGTGGGCTAACCATACCTCGGAGAAAGGATACACTTCTTCCCTCGCACATGGTCAATCCAGCGCTTTGAATTTGTGCTCTGGTTGGAACATGAACCAAACATATCCTCAATTGGAGCACATCACGAAACAGGGGAGCAGTAGTTATGATGGAGAAGTTCAACTGCAGAAGCCGTCTATCATCAACCCCTTCCCTTGTGATGCTATAACTAGAACACGACTTTGTGGGGTGGATTATGATGGAAGTAGGAGTGTCGAAAACCCCTCAATATTCTCTCACATTATGCACCCCATGCTAGCCTCACTTCAGGATACAAACGAAAGAACGAGGGGAATTGCTAACTGTGAGCTGCCTGAATTTCTCTCGTCCGAAAGAGCTGTTGGCGATCCAGTGGCGTTTCGATGTGACAATAGTTTTATCATACAAGGAAAAGATTTAAATTATTGCATAGACAAAGGATACAATTCTTTGAGGGGTAACAAAAAGAATTCCCTCAATGAGGGTGCATTTGCCACTGCAGGGGAGAAAGCTTCTAGACGCAATTATTATACTCCTGGCAGTCAATTTTGTGGGAATAACGGAAGTCTTCTTGGTGATTTGCCACTGCACTCACCATTGAATTTCTGTTCTTTGGATGAGTGCCAAAGTTACATTAACTTTCTGGCAAAGGATCAGAACGGATGCCGCTTCCTACAAAGGATGGTTGATAAGGGGAATAAGGAGATGCTTATAGTATTTGAGGGAATAATTGATAATGTTGTTGAACTCATGATAGACCCCTTTGGTAACTATCTTGTGCAGAAGTTGCTGGATGTGTGCAGAGAAGAACAGAAATTGCAGATTGTGTCCATGGTGACCAAAGAACCAGGGCAGCTCGTCAGAGTATCTTTAAACACGCATGGCACACGGGTGATACAGAAGTTGATTGAGACGCTCAACAAGTCTAGGAAACAAATTTCATTAGTGAAGTCAGCCCTTCAAGCAGGTTTTCTTGATCTTATTAAGGATCTGAATGGAAATCATGTGATACAACGTTGCTTGGAATGCCTTACCTGTCAAGATAATGAGTATATTTTTTATGCTGCCGCAAAGTTTTGTGTTGACATAGCTACTCATCGACATGGATGTTGTGTATTGCAACGTTGCATTGATCATTCAGTTGGCAAATATCGAGATAAACTGGTTACAGAAATATGTAGACATGCGCTTCTCCTTGCTCAAGATCCTTTTGGAAATTATGTTGTTCAGTATATAATAGAGATGGGGATCCCAGCTCTCTCAGCCAAGCTGACTTCTCAGTTCAAAGGGAACTATGCAAATCTGTCTATGCAAAAATTTAGCAGTCATGTGGTTGAAAAATGCCTTAGGCATGTTGTAGTGAGCAGATCAAGAATCGTCCGAGAATTGCTGTCTTCACCTCACTTCGAACAGTTGTTGCAAGATCCATTTGCCAACTATGTCATTCAGTCTGCTCTTTCAGTGACAAAGGGCTCACTTCATACAACTTTGGTTGAAGCAGTTCGTCCTTACAAAATCTTGCGCACCAGCCCGTTCAGCAAGAGGATTTTCTCGGGAAATCTACTCAAGAAGTAA 2217 0.4253 MFNNTSEKNKSNAENNNMKRDEVLDTWWNGFQNTSYPNLHHVHPYNEHLAINSPLWKVSHSSHSPPSTSFADGLHVSPRSSSYSASFQDRQHLTPYDHHSTNFLLDSETSGFHIGKSIVDNQVVDLDLSQDFYRMNIIDGQGNGNRTKAPEADSYGFGFDAFPFDINIPGVSETRSSYEDFCNEVPAPNNGCIPSSTWGVSPSMVASMKWANHTSEKGYTSSLAHGQSSALNLCSGWNMNQTYPQLEHITKQGSSSYDGEVQLQKPSIINPFPCDAITRTRLCGVDYDGSRSVENPSIFSHIMHPMLASLQDTNERTRGIANCELPEFLSSERAVGDPVAFRCDNSFIIQGKDLNYCIDKGYNSLRGNKKNSLNEGAFATAGEKASRRNYYTPGSQFCGNNGSLLGDLPLHSPLNFCSLDECQSYINFLAKDQNGCRFLQRMVDKGNKEMLIVFEGIIDNVVELMIDPFGNYLVQKLLDVCREEQKLQIVSMVTKEPGQLVRVSLNTHGTRVIQKLIETLNKSRKQISLVKSALQAGFLDLIKDLNGNHVIQRCLECLTCQDNEYIFYAAAKFCVDIATHRHGCCVLQRCIDHSVGKYRDKLVTEICRHALLLAQDPFGNYVVQYIIEMGIPALSAKLTSQFKGNYANLSMQKFSSHVVEKCLRHVVVSRSRIVRELLSSPHFEQLLQDPFANYVIQSALSVTKGSLHTTLVEAVRPYKILRTSPFSKRIFSGNLLKK 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2583 738 SUPERFAMILY ARM repeat 419 731 IPR016024 -
Alju07g2583 738 Gene3D - 411 735 IPR011989 -
Alju07g2583 738 FunFam Pumilio homolog 9 411 738 - -
Alju07g2583 738 ProSiteProfiles Pumilio RNA-binding repeat profile. 676 713 IPR001313 GO:0003723
Alju07g2583 738 ProSiteProfiles Pumilio RNA-binding repeat profile. 569 604 IPR001313 GO:0003723
Alju07g2583 738 PANTHER RNA BINDING PROTEIN PUMILIO-RELATED 163 731 - -
Alju07g2583 738 ProSiteProfiles Pumilio RNA-binding repeat profile. 492 531 IPR001313 GO:0003723
Alju07g2583 738 ProSiteProfiles Pumilio RNA-binding repeat profile. 533 568 IPR001313 GO:0003723
Alju07g2583 738 SMART pum_5 421 455 IPR001313 GO:0003723
Alju07g2583 738 SMART pum_5 641 675 IPR001313 GO:0003723
Alju07g2583 738 SMART pum_5 678 713 IPR001313 GO:0003723
Alju07g2583 738 SMART pum_5 456 491 IPR001313 GO:0003723
Alju07g2583 738 SMART pum_5 533 568 IPR001313 GO:0003723
Alju07g2583 738 SMART pum_5 495 531 IPR001313 GO:0003723
Alju07g2583 738 SMART pum_5 605 640 IPR001313 GO:0003723
Alju07g2583 738 SMART pum_5 569 604 IPR001313 GO:0003723
Alju07g2583 738 Pfam Pumilio-family RNA binding repeat 609 628 IPR001313 GO:0003723
Alju07g2583 738 Pfam Pumilio-family RNA binding repeat 645 677 IPR001313 GO:0003723
Alju07g2583 738 Pfam Pumilio-family RNA binding repeat 429 449 IPR001313 GO:0003723
Alju07g2583 738 Pfam Pumilio-family RNA binding repeat 682 700 IPR001313 GO:0003723
Alju07g2583 738 Pfam Pumilio-family RNA binding repeat 460 492 IPR001313 GO:0003723
Alju07g2583 738 Pfam Pumilio-family RNA binding repeat 538 566 IPR001313 GO:0003723
Alju07g2583 738 Pfam Pumilio-family RNA binding repeat 499 526 IPR001313 GO:0003723
Alju07g2583 738 Pfam Pumilio-family RNA binding repeat 574 607 IPR001313 GO:0003723
Alju07g2583 738 ProSiteProfiles Pumilio RNA-binding repeat profile. 456 491 IPR001313 GO:0003723
Alju07g2583 738 CDD Pumilio 429 732 IPR033712 GO:0003723
Alju07g2583 738 ProSiteProfiles Pumilio RNA-binding repeat profile. 605 640 IPR001313 GO:0003723
Alju07g2583 738 ProSiteProfiles Pumilio homology domain (PUM-HD) profile. 400 738 IPR033133 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2583 Alju-ChrAlju07 51439234 51444230 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g2583 07 51439234 51444230 Alju07g2583 07 51439234 51444230 ECH