Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2568 ATGTCAGGCGGTGGGTGTAGCATAGTGTGGTTCAGAAGAGATCTGAGATTAGAGGATAATCCAGCTCTGACGGCGGGAATGAGAGCTGGCGCGGTGGTCGCACTTTTTATATGGGCACCTGAGGAAGAGGGTCAATACCAGCCCGGAAGGGTGTCCAGGTGGTGGCTCAAACAAAGTTTGGCTCACCTTGATTCGTCTTTGAGAAGTCTTGGCACTCCTCTTATCACCAAGCGCTCGGCTGATAGTGTTTCTTCTCTCCTGGAGGTTGTCAAGGCCACTGGAGCTACTCAACTCTTCTTTAATCACTTATACGATCCCCTGTCACTTATTAGGGATCACCGGGCAAAGGAGGTACTGACTGCTCAAGGCATAGCCGTACGATCCTTCAATGCAGATTTATTGTATGAACCATGGGAAGTCAATGATACCCATGGCCAGGCATTCACCACTTTTTCCACTTTTTGGGAAAGATGCCTCAACATGCCTTATGACCCGGAGGCACCTCTTCTTCCGCCTAAAAGAATTATTGCAGGTGATGTATCAAAGTGCCCTTCTGATACTTTGGTGTTTGAAGATGAATCTGAGAAGGCAAGCAATGCACTTCTTGCCCGAGCATGGTCACCTGGATGGAGCAATGGCGACAAGGCCTTGACTGCGTTCATAAATGGCCCATTGATTGAGTATTCAAAAAATCGCAGGAAAGCTGACAGCGCCACAACCTCATTTCTTTCCCCCCATTTGCATTTTGGAGAGTTGAGTGTCAAGAAGGTCTTCCATCTCGTCCGAATTAAGCAGGTTTTATGGGCCAATGAAGGGAACAAGGCCGGTGAAGAAAGTGTCAACCTGTTTCTCAAGTCTATTGGTCTCAGAGAGTATTCGAGGTACATTAGTTTCAACCATCCCTATAGTCATGAAAGGCCTCTTCTGGGCCACCTTAAGTTCTTTCCTTGGGTGGTAAATGAAGGCTATTTTAAGGCATGGAGGCAAGGAAGAACTGGTTACCCCTTGGTGGATGCTGGGATGAGGGAATTGTGGGCCACTGGTTGGCTGCATGATCGGATACGTGTTGTTGTTTCCAGTTTCTTTGTGAAGGTTCTGCAGCTTCCCTGGAGATGGGGAATGAAATATTTTTGGGACACTCTTTTAGATGCAGATCTTGAGAGTGATGCTCTCGGTTGGCAGTACATATCAGGTACTCTTCCTGATGGCCGTGAATTTGACCGAATAAATAACCCACAGTTTGAGGGATACAAGTTTGATCCCAATGGAGAATATGTACGACGATGGCTTCCAGAACTCTCCAGACTACCAACTGAATGGATACATCACCCATGGAATGCACCAGAATCTGTACTTCAAGCTGCTGGAATTGAATTAGGGTATAATTATCCTTTTCCTATTGTGGTTCTAGATGCAGCAAAAGCCCGATTGGAAGAAGCACTATTACAAATGTGGCAACAAGAAGCAGCCTCAAGAGCCGCAATTGAAAATGGAACTGAGGAAGGGCTTGGAGACTCCTCTGAATCAGCCCCTATTGCCTTTCCGCTGGACATACAAATGGAGGAAAGTCATGATCCTGTTAGGAACAACCCCCTTTCTGTGGCCCAGTCCTACGAGGATCAGATGGTCCCAAGCATCACTTCCCAAGTGAGGGTGGAAGATGAAGAAGCTTCTTCAGATCTTCGAAACTCAACAGGAGATAGCAGAGCTGAAGTGCCAATGAATGTAAATGTACAACAGAATGCGAGAGAGACCTTGAACCAAGGGCCTAACCAAGGGACTTTACAGTTTGTTTACAGGAATACTCAAATACAGAATGGTGAAACCGGACTGAGAAGTGCAGCTGAAGAATCTACGGCAGAATCTTCAAGTAGTAGTAGTAGGAGAGACGGAGGTGTAGTTCCTGAGCTAGCTCATCTTACTTGCAGACGCATCCTCAGTCTCATCAACTCATGA 1956 0.4668 MSGGGCSIVWFRRDLRLEDNPALTAGMRAGAVVALFIWAPEEEGQYQPGRVSRWWLKQSLAHLDSSLRSLGTPLITKRSADSVSSLLEVVKATGATQLFFNHLYDPLSLIRDHRAKEVLTAQGIAVRSFNADLLYEPWEVNDTHGQAFTTFSTFWERCLNMPYDPEAPLLPPKRIIAGDVSKCPSDTLVFEDESEKASNALLARAWSPGWSNGDKALTAFINGPLIEYSKNRRKADSATTSFLSPHLHFGELSVKKVFHLVRIKQVLWANEGNKAGEESVNLFLKSIGLREYSRYISFNHPYSHERPLLGHLKFFPWVVNEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGREFDRINNPQFEGYKFDPNGEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGIELGYNYPFPIVVLDAAKARLEEALLQMWQQEAASRAAIENGTEEGLGDSSESAPIAFPLDIQMEESHDPVRNNPLSVAQSYEDQMVPSITSQVRVEDEEASSDLRNSTGDSRAEVPMNVNVQQNARETLNQGPNQGTLQFVYRNTQIQNGETGLRSAAEESTAESSSSSSRRDGGVVPELAHLTCRRILSLINS 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2568 651 Gene3D DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 301 502 - -
Alju07g2568 651 Pfam DNA photolyase 7 162 IPR006050 -
Alju07g2568 651 Coils Coil 470 490 - -
Alju07g2568 651 PANTHER CRYPTOCHROME 6 490 IPR002081 -
Alju07g2568 651 MobiDBLite consensus disorder prediction 608 632 - -
Alju07g2568 651 MobiDBLite consensus disorder prediction 608 630 - -
Alju07g2568 651 FunFam Deoxyribodipyrimidine photo-lyase 301 490 - -
Alju07g2568 651 ProSitePatterns DNA photolyases class 1 signature 2. 352 371 IPR018394 -
Alju07g2568 651 PRINTS DNA photolyase signature 332 348 IPR002081 -
Alju07g2568 651 PRINTS DNA photolyase signature 352 370 IPR002081 -
Alju07g2568 651 PRINTS DNA photolyase signature 391 405 IPR002081 -
Alju07g2568 651 SUPERFAMILY Cryptochrome/photolyase FAD-binding domain 194 488 IPR036134 -
Alju07g2568 651 NCBIfam cryptochrome photoreceptor 6 481 IPR014134 GO:0009785|GO:0009882
Alju07g2568 651 Gene3D HUPs 8 206 IPR014729 -
Alju07g2568 651 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 5 134 IPR006050 -
Alju07g2568 651 ProSitePatterns DNA photolyases class 1 signature 1. 332 344 IPR018394 -
Alju07g2568 651 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 7 176 IPR036155 -
Alju07g2568 651 Pfam Blue/Ultraviolet sensing protein C terminal 510 626 IPR020978 -
Alju07g2568 651 Gene3D - 134 293 - -
Alju07g2568 651 MobiDBLite consensus disorder prediction 548 571 - -
Alju07g2568 651 Pfam FAD binding domain of DNA photolyase 283 480 IPR005101 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2568 Alju-ChrAlju07 51342437 51346013 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g2568 07 51342437 51346013 Alju07g2568 07 51342437 51346013 ECH