Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2476 ATGAGATATATTATGCTACTTTTTTGGGGTAAAATATATTTTGCTCCTCTATTTGAACAACTCATTGCCGTGATATCTTGGTTATATATATCATATATTTGTTTGGGAACCTTCTTGTGTCCAAAGAGAACCGGTCTCTTTCCTACTCGTCTAGAGAAGGAAATAAAGCAGCTAATATGGTTGCTAATTGGGTGGTTGTTCAAGCCAACATTTCTTCTGATAGAAATTTTATCTCAGGATGCAAGGGATGCTCAATGTCTTAGTCCTGATTCTGATTCTAGAGGCTATCAAGCTGCGAGGGAAGGAATTAGCCAGTTGCGGATTGATGTTGTATTTTGTTTTCGTAGTATACAAAGGAGAGGGCTGCTTCACACGCTGCCACGCGATTCGTCGTGTTTACCGTGCAAAATGGCAACATTCGAACTGTACCGGAGGTCGACGGTCGGAATATGTCTCACCGATACTCTCGACGGGATGGTTCAGAACGGTACTCTCAGCCCTGAGGATGCTATTCAGGTTCTTGTCCAGTTTGATAAGTCTATGACTGAAGCTCTGGAAACGCAAGTCAAGAGTAAGATCTCCATTAAGGGGCATCTACATACATACAGATTCTGCGACAATGTTTGGACCTTCATTTTGCATGATGTTTTGTTCAAGAGTGATGAATGCCAAGAGAACATTGCAAAGCTAAAAATAGTGGCATGTGACTCGAAGTTGCTATCGCAATAA 729 0.4156 MRYIMLLFWGKIYFAPLFEQLIAVISWLYISYICLGTFLCPKRTGLFPTRLEKEIKQLIWLLIGWLFKPTFLLIEILSQDARDAQCLSPDSDSRGYQAAREGISQLRIDVVFCFRSIQRRGLLHTLPRDSSCLPCKMATFELYRRSTVGICLTDTLDGMVQNGTLSPEDAIQVLVQFDKSMTEALETQVKSKISIKGHLHTYRFCDNVWTFILHDVLFKSDECQENIAKLKIVACDSKLLSQ 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2476 242 SUPERFAMILY Transcription factor IIA (TFIIA), alpha-helical domain 140 190 - -
Alju07g2476 242 FunFam Transcription initiation factor IIA subunit 2 191 242 - -
Alju07g2476 242 PANTHER TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 2 137 242 IPR003194 GO:0005672|GO:0006367
Alju07g2476 242 FunFam Transcription initiation factor IIA subunit 2 138 190 - -
Alju07g2476 242 CDD TFIIA_gamma_C 193 238 IPR015871 GO:0005672|GO:0006367
Alju07g2476 242 Gene3D - 191 241 IPR009088 GO:0005672|GO:0006367
Alju07g2476 242 Gene3D - 139 190 IPR009083 GO:0005672|GO:0006367
Alju07g2476 242 SUPERFAMILY Transcription factor IIA (TFIIA), beta-barrel domain 188 238 IPR009088 GO:0005672|GO:0006367
Alju07g2476 242 CDD TFIIA_gamma_N 140 187 IPR015872 GO:0005672|GO:0006367
Alju07g2476 242 Pfam Transcription initiation factor IIA, gamma subunit, helical domain 140 185 IPR015872 GO:0005672|GO:0006367
Alju07g2476 242 Pfam Transcription initiation factor IIA, gamma subunit 196 237 IPR015871 GO:0005672|GO:0006367
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2476 Alju-ChrAlju07 50433312 50439666 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g2476 07 50433312 50439666 Alju07g2476 07 50433312 50439666 ECH