Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2369 ATGGCGTCATCTTGCAGGTTTTTATTATCAGTGAGGAAGAGGTACGATGGAAGGTTCAACTTTCTAGCTCTTCCTTCAAGCTCTCACCATTTGAATTTCCACAATGAATCAAGTTCAAATCCCTTGCTCGTCAAATTACTTCGGGGATCCGATTCGCGCCTTAAAGCTACGCTGGATCAGGAATTTTGTTCCCTTAAAAGCTCCGAATTTTCTTGGGAATCTCTGGTTACCTGTCTTAGGCCTTCTTCTCCTGAGAAAGCTCGGCTGGTTCTGGAATGGGTTTTGGAGAAATTGCTGAAAGAAAATGAGAGAAATCACAGTGCCTTCTCCGATTACATATTTCTTTGCGGCAAGCTTCAGAATGTGCCACTCGCAATGCAAGCGTTTGCTTCTATGGAGGCTAATGGAGTTAAACCCACCTCCCTGGTTTTTAATTCACTCATAAATGCTTGCTTGGGTTCCAATGATATTACTACAGCATTTAGCTTATTTGAGATCATGGAAAGTTCAGAGAGCTATAAACCTGATTTTCAAAGTTATAATATGTTCATTACAGCATTTTCAATGTCAGGAAACATTGATGCCATGTTAGGCTGGTACTCAGCTAAAAAAGTTGCTGGATTTGGTCCTGATCTTCAAACATTCGAGTCTCTTATATCAGGTTGTATCAAATCAAGAAATTTTGAACTAGCTAATGAAATTTATGAAGAAATGATGTTATCAGGAATTATACCTAGCATATCCATTCTGGAAAACATGCTTGAAGGGCTTTGCAAGCAAAAGAGTTTGGGTCGAGCTGAGGAGTTCTTTAAGTACGTGATAGGTGTCAGATGGGAGATCAATGAAAACATGACTGATAAATTAATGGCACTGTATCAAGAAATTGGGCAACTGGAGAAGATGGAGAAGCTGCTTGAAACTATGATTAAGTCCCATTCTATTACCGATGGAGTCTTCTCTCGAATTCACTGCGGGATTATACGAATGTATGCCAAACTGGATAGATTGGATGATGTAGAATTTGCTGTGGGAAGAATGTTGAAACAAGGGCTATCATTCACAAGTTCAGATGATGTTGAAAAGGTTATCTGCTCATACTTCAGAAGAGAAGCTTATGATAGGCTAGAAATATTATTGGAATACATAGGGACTAGCTATACGCTGAGCAGATCCACTTACGATTTGTTGATATCTGGCTATAGAAGAGCTGGATTATACGAAAAAGTAGATTCAATGATCGAAGCCATGAAATCAGCTGGGGTTACGTAA 1269 0.394 MASSCRFLLSVRKRYDGRFNFLALPSSSHHLNFHNESSSNPLLVKLLRGSDSRLKATLDQEFCSLKSSEFSWESLVTCLRPSSPEKARLVLEWVLEKLLKENERNHSAFSDYIFLCGKLQNVPLAMQAFASMEANGVKPTSLVFNSLINACLGSNDITTAFSLFEIMESSESYKPDFQSYNMFITAFSMSGNIDAMLGWYSAKKVAGFGPDLQTFESLISGCIKSRNFELANEIYEEMMLSGIIPSISILENMLEGLCKQKSLGRAEEFFKYVIGVRWEINENMTDKLMALYQEIGQLEKMEKLLETMIKSHSITDGVFSRIHCGIIRMYAKLDRLDDVEFAVGRMLKQGLSFTSSDDVEKVICSYFRREAYDRLEILLEYIGTSYTLSRSTYDLLISGYRRAGLYEKVDSMIEAMKSAGVT 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2369 422 NCBIfam pentatricopeptide repeat 214 246 IPR002885 -
Alju07g2369 422 NCBIfam pentatricopeptide repeat 143 176 IPR002885 -
Alju07g2369 422 NCBIfam pentatricopeptide repeat 392 421 IPR002885 -
Alju07g2369 422 PANTHER EXPRESSED PROTEIN 34 421 IPR044179 GO:0003729
Alju07g2369 422 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 389 422 IPR002885 -
Alju07g2369 422 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 211 245 IPR002885 -
Alju07g2369 422 Gene3D Tetratricopeptide repeat domain 73 291 IPR011990 GO:0005515
Alju07g2369 422 Pfam PPR repeat 391 421 IPR002885 -
Alju07g2369 422 Coils Coil 281 301 - -
Alju07g2369 422 Pfam Pentatricopeptide repeat domain 120 151 IPR002885 -
Alju07g2369 422 Pfam Pentatricopeptide repeat domain 206 247 IPR002885 -
Alju07g2369 422 Gene3D Tetratricopeptide repeat domain 292 422 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2369 Alju-ChrAlju07 49486567 49488327 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2369 120 421 Miscellaneous Gene Families AT4G11690 24.437 8.40e-06 46.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g2369 07 49486567 49488327 Alju07g2369 07 49486567 49488327 ECH