Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2323 ATGCTCGAAATTCACATTCTCTCCTACCCCACTCCACTTCAATCTAACTCAAAACCGATTTCTTCCTTTCTTATCACCTCTTCTTCTTCTTCTTCTCCAACTCGGCGTCGCTTGACGAACACCGCTAATCCGCGTAAAAAGGATCTTAAGTGCCTTACTTCCCGCATCGTCCAACTCACCCGCCGAAGGCAGCTTCACCAGATTTTTGAAGAGATTGAAATTGCCAAGAAACGTTATGGGAAGCTGAACACTATTGTCATGAACGCAGTCATGCAGGCCTGTGTTCATTGCGGAGATATTGATTCAGCTCTTAGGATATTTAATGAGATGACAAAACCGGGGAGCTGTGTCGCGGATACTGTCACGTATGCCACGCTTTTGAAGGGATTGGGCGAGTTGAGGAAAGTTGATGAAGCCTTTCAATTGCTTGAATCCGTGGAAAAAGGTACTGCACCCGGAAATCCAAAGCTGTCAGCGTCATTGATCTTTGGTCTGCTAAATGCCATAATCGAAGCAGATTGCTCTGTCGCAGGAGACTTGCGTCGTGCAAATGGCCTCCTTGCTCGTTATGGTTATGTATTTCGTGAAGGTGGCAGTTTCTCAGTCTCAGTATACAACTTACTCATAAAGGGGTATGTCACCGCAGGTTTTCCTCTAGACGCTGTAAACTTGCACAATGACATGTTACGACATGGAATGAAGCCTGACAGGCTTACCTACAACACTCTCATATTAGCATGTGTCAAGAGTCAAAACATGGATATTGCAGTGCAATTTTTTGAAAACATGAAGGATGAAGCACATACACCGACCCACAATGACGTTTTGCCAGATATCGTCACATATACAACGCTGCTCAAGGGTTTTGGGCAGGCCAAAGATCTCTCGTCAGTCCTGAGAATAGTGCTGGAAATGAAATCATGTCAGGAATTGTATATTGATCGAACAGCTTACACTGCAATAATTGATGCTTTATTAAACTGTGGCTCAATTAAGGGTGCTCAATGCATCTTTGGAGAAATACTGAAGCTGGCTGGTTGGAATCCAGAGTTGAAGCCCAAGCCTCACCTTTATCTTTCCATGATGCGTGCTTTTGCTTCTAGAGGAGAATACAATGTAGTCAAAAACTTGCATAGGCGGCTTTTACCAGATTCTGCAGGAACCATCTTGCCAGTTGCTCAAGAAGAAGCTGATCATCTTCTCATGGAAGCAGCACTGAATAATGGTCAGGTCGATGCTGCCTTTGAAACTCTTGTTAATATTGCTTCAAAATGGAAGGATATATCATGGACAAGTCGGGGAGGCAGGGCAACTTTGCGCATTGAGGCCACATTGGGATTCTCAAAATCCGTATTCAGTCCTTGCCTACTTCCACAGGTTTCACCTGCTGAACCAGTTGAGAGATTCATGTTGCCATTTGAGGCAACAGGGCCACTACAAGGCACTGTCCAATTGAAGGAAGTGGTTATACGTTTCTCTGATGATGCAGTTGTTCCAATAGTAGATGATTGGGGCAGCTGTATAGGATTGGTGCACCGTGAAGACTGTGCTCAGTTGGACTTGAATGCTTCACTTTCAACAATGATGAGAAGCCCGCCTCCCACTGTTACAACTACAACATCAATTGGTCACGTTGTTGATTTGATTTTGGAAAAGGGCTACCCAATGGTTATCATTGTAAAGTACACCAGCTCATATGGTACTACTTACAGCTCAAGGGCAGTTGGAGTTTTTACATCACAACAATTGTGTAGGCTTATCACACCTGCCTTTGTATCTCGAGGGCCAAAACTTTCAATCTTCAGAAGATAA 1812 0.4415 MLEIHILSYPTPLQSNSKPISSFLITSSSSSSPTRRRLTNTANPRKKDLKCLTSRIVQLTRRRQLHQIFEEIEIAKKRYGKLNTIVMNAVMQACVHCGDIDSALRIFNEMTKPGSCVADTVTYATLLKGLGELRKVDEAFQLLESVEKGTAPGNPKLSASLIFGLLNAIIEADCSVAGDLRRANGLLARYGYVFREGGSFSVSVYNLLIKGYVTAGFPLDAVNLHNDMLRHGMKPDRLTYNTLILACVKSQNMDIAVQFFENMKDEAHTPTHNDVLPDIVTYTTLLKGFGQAKDLSSVLRIVLEMKSCQELYIDRTAYTAIIDALLNCGSIKGAQCIFGEILKLAGWNPELKPKPHLYLSMMRAFASRGEYNVVKNLHRRLLPDSAGTILPVAQEEADHLLMEAALNNGQVDAAFETLVNIASKWKDISWTSRGGRATLRIEATLGFSKSVFSPCLLPQVSPAEPVERFMLPFEATGPLQGTVQLKEVVIRFSDDAVVPIVDDWGSCIGLVHREDCAQLDLNASLSTMMRSPPPTVTTTTSIGHVVDLILEKGYPMVIIVKYTSSYGTTYSSRAVGVFTSQQLCRLITPAFVSRGPKLSIFRR 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2323 603 Gene3D Tetratricopeptide repeat domain 273 442 IPR011990 GO:0005515
Alju07g2323 603 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 236 270 IPR002885 -
Alju07g2323 603 PANTHER OS09G0431600 PROTEIN 25 590 IPR044781 -
Alju07g2323 603 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 119 149 IPR002885 -
Alju07g2323 603 ProSiteProfiles CBS domain profile. 528 598 IPR000644 -
Alju07g2323 603 SUPERFAMILY CBS-domain pair 493 567 IPR046342 -
Alju07g2323 603 MobiDBLite consensus disorder prediction 24 39 - -
Alju07g2323 603 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 201 235 IPR002885 -
Alju07g2323 603 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 278 308 IPR002885 -
Alju07g2323 603 Pfam PPR repeat family 202 249 IPR002885 -
Alju07g2323 603 Pfam PPR repeat family 83 130 IPR002885 -
Alju07g2323 603 NCBIfam pentatricopeptide repeat 280 308 IPR002885 -
Alju07g2323 603 NCBIfam pentatricopeptide repeat 239 270 IPR002885 -
Alju07g2323 603 NCBIfam pentatricopeptide repeat 87 111 IPR002885 -
Alju07g2323 603 NCBIfam pentatricopeptide repeat 204 236 IPR002885 -
Alju07g2323 603 NCBIfam pentatricopeptide repeat 121 145 IPR002885 -
Alju07g2323 603 Gene3D Tetratricopeptide repeat domain 37 149 IPR011990 GO:0005515
Alju07g2323 603 MobiDBLite consensus disorder prediction 24 44 - -
Alju07g2323 603 Gene3D - 480 588 IPR046342 -
Alju07g2323 603 Pfam PPR repeat 317 343 IPR002885 -
Alju07g2323 603 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 83 117 IPR002885 -
Alju07g2323 603 Pfam Pentatricopeptide repeat domain 273 306 IPR002885 -
Alju07g2323 603 Gene3D Tetratricopeptide repeat domain 156 272 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2323 Alju-ChrAlju07 49050043 49054548 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2323 83 382 Glycosyltransferase AT1G05670 24.074 4.68e-14 73.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g2323 07 49050043 49054548 Alju07g2323 07 49050043 49054548 ECH