Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2222 ATGTCAAAAGTCCTCGGTTTTACCGGAATTGATGATTTTTTCCCCGGGGGGTCAATATATGCTAACCCCAAGGAGCCCAGTCTCCTGTTGTCTCTTGGTCGTCATGTTGATGTGTACTTTCCACCTCAGAAGAGATCTCGTACCAGTGCTCCGTTGAAGAGATCACACATCAATGATCCTTTTATTCTCGGTGGAGAGTGGTTTGAGGCCGAGGAGAAGCAGCAGACATCCATTGAAGATTTGCCTGATGAATGCCTCTTTGAGATCTTCAGAAGGTTGCCCGGCGGTCAGGAGAGGAGTTCATGTGCCTGTGTTTCCAAGCGCTGGCTTTGGCTTTTAAGTAATATTTGCAAGGATGAAATTTGCAGCACCGAAAAGACTAGTCATGAGAATGATGTTACTGGAGTGGAGGCTGATGTTGAGGAATTTGGGGGTGGTGGATACCTCTCCCGAGACTTGGAAGGAAAGAAAGCGACTGATGTTAGACTTGCTGCTATTGCTGTTGGGACTGCTTCTCGTGGTGGATTGGGAAAGCTTTCAATCCGCGGGGGCAATTCAGGTTGTGCAGTGACTAATCTTGGTCTAAGGGCAGTTGCCCATGGATGCCCTTCTTTGAAGACTCTTTCTCTTTGGAATGTTTCTACCATAGATGATGAAGGCCTGATTGAGATTGCTAGGGGATGTCCCCAGTTAAAGAAGCTTAATCTTTGCTATTGTCCCACAGTATCTGATAAGGCTTTAATTGCAGTTGCAAAGAACTGCCCTAACCTGATAGAGTTATCGATTGAAACATGTCCCAGCATTGGTAATGAAGGTCTACAAGCTATTGGGCAGCTTAGCACTAGCCTAAGGTCCTTATCAATAAAAAATTGCCCTTGTGTTGGTGATCAGGGAATTGCGAGCCTTTTTTCTTCAGCTTCTTTTCTTACAAAATTGAAGCTTGAGGCACTGACAATCTCTGACCTCTCTTTAGCTGTTATTGGACATTATGGTAAGGCAGTTGCCGATCTTGCCCTTAAATACCTCCCTAATGTTAGTGAGAAAGGGTTCTGGCTCATGGGTCATGGTTTCGGGTTGCAGAAGTTAAATTCACTCTCAATTGCATCCTGTCAAGGAGTTACAGATATTGGACTTGATGCTTTAGGAAGGGGCTGCCCAAATCTCAAGCACCTGTATCTCTGTAAAAGTACATTCCTATCAGATTATGGGATGGTCTCATTTTCCAAAGCTGCTTTATCAATTGAGAGCCTAAAATTGGAGGAGTGCCACAGAATCACCCAGCTTGGGTTTTTTGGTGTCCTTTTCAATTGTTGTGCCAAATTGAAGGCCCTTGCACTTATAAGCTGCTTTGGGATTAAGGATCAGAATTTGGTGTTTCCTTCTTTATCTCCTTGTTCGCTTCGGTCTCTCTCAATTCGTAACTGTCCTGGATTTGGTGATGCTACAATGGCTTTATTGGGAAAGCATTGCCCTCAGTTGCAGTATGTTGAGTTGAGCAAACTTGAGGGAGTGACTGATGCGGGGTTCCTCCCTGTGCTTTTGAATTCTGAGGCTGGTCTGGCTAAAGTTAATCTCAGTCACTGCATAAATGTGACAGATAAAGTAGTTTCATCCCTTGCAAATAGGCATGGCTTGACTCTTGAGGTCTTGAATCTTGATGGTTGTAAAAAGATCAGCGATGTTAGCTTGATGGCAATTACTGAAAACTGCCCATTGATCGGGGATCTGGATGTGTCTGAGTCTGCAATTACTGATACTGGTATCTCAGCCCTGGCAGGCGGTGGCATGTTCCATTTGCAGATTTTATCCTTGTCGGGTTGCTCTCTTGTTTCAAACAAGAGCCTGCCTGCTTTGCGAAATATGGGTGAGACCCTTCTGGGATTAAATATCCGCAACTGCAAGGCAATTAATAGTCGTACTATTGGGAAGCTTGTGGAACAGCTCTGGAGGTGTGACATACTAGCTTGA 1968 0.4472 MSKVLGFTGIDDFFPGGSIYANPKEPSLLLSLGRHVDVYFPPQKRSRTSAPLKRSHINDPFILGGEWFEAEEKQQTSIEDLPDECLFEIFRRLPGGQERSSCACVSKRWLWLLSNICKDEICSTEKTSHENDVTGVEADVEEFGGGGYLSRDLEGKKATDVRLAAIAVGTASRGGLGKLSIRGGNSGCAVTNLGLRAVAHGCPSLKTLSLWNVSTIDDEGLIEIARGCPQLKKLNLCYCPTVSDKALIAVAKNCPNLIELSIETCPSIGNEGLQAIGQLSTSLRSLSIKNCPCVGDQGIASLFSSASFLTKLKLEALTISDLSLAVIGHYGKAVADLALKYLPNVSEKGFWLMGHGFGLQKLNSLSIASCQGVTDIGLDALGRGCPNLKHLYLCKSTFLSDYGMVSFSKAALSIESLKLEECHRITQLGFFGVLFNCCAKLKALALISCFGIKDQNLVFPSLSPCSLRSLSIRNCPGFGDATMALLGKHCPQLQYVELSKLEGVTDAGFLPVLLNSEAGLAKVNLSHCINVTDKVVSSLANRHGLTLEVLNLDGCKKISDVSLMAITENCPLIGDLDVSESAITDTGISALAGGGMFHLQILSLSGCSLVSNKSLPALRNMGETLLGLNIRNCKAINSRTIGKLVEQLWRCDILA 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2222 655 FunFam EIN3-binding F-box protein 1 148 266 - -
Alju07g2222 655 PANTHER UNCHARACTERIZED 359 541 - -
Alju07g2222 655 Gene3D Ribonuclease Inhibitor 152 355 IPR032675 -
Alju07g2222 655 FunFam EIN3-binding F-box protein 1 516 653 - -
Alju07g2222 655 SUPERFAMILY F-box domain 72 115 IPR036047 GO:0005515
Alju07g2222 655 Pfam F-box-like 78 109 IPR001810 GO:0005515
Alju07g2222 655 Gene3D - 70 123 - -
Alju07g2222 655 Gene3D Ribonuclease Inhibitor 515 576 IPR032675 -
Alju07g2222 655 Gene3D Ribonuclease Inhibitor 577 653 IPR032675 -
Alju07g2222 655 Gene3D Ribonuclease Inhibitor 461 514 IPR032675 -
Alju07g2222 655 Gene3D Ribonuclease Inhibitor 377 460 IPR032675 -
Alju07g2222 655 SMART fbox_2 81 122 IPR001810 GO:0005515
Alju07g2222 655 FunFam EIN3-binding F-box protein 1 267 456 - -
Alju07g2222 655 Pfam Leucine Rich repeat 280 302 IPR001611 GO:0005515
Alju07g2222 655 Pfam Leucine Rich repeat 253 276 IPR001611 GO:0005515
Alju07g2222 655 Pfam Leucine Rich repeat 546 566 IPR001611 GO:0005515
Alju07g2222 655 Pfam Leucine Rich repeat 360 381 IPR001611 GO:0005515
Alju07g2222 655 SUPERFAMILY RNI-like 186 381 - -
Alju07g2222 655 SMART LRR_CC_2 228 253 IPR006553 -
Alju07g2222 655 SMART LRR_CC_2 359 384 IPR006553 -
Alju07g2222 655 SMART LRR_CC_2 490 515 IPR006553 -
Alju07g2222 655 SMART LRR_CC_2 570 594 IPR006553 -
Alju07g2222 655 SMART LRR_CC_2 280 305 IPR006553 -
Alju07g2222 655 SMART LRR_CC_2 202 227 IPR006553 -
Alju07g2222 655 SMART LRR_CC_2 385 410 IPR006553 -
Alju07g2222 655 SMART LRR_CC_2 517 542 IPR006553 -
Alju07g2222 655 SMART LRR_CC_2 254 279 IPR006553 -
Alju07g2222 655 SMART LRR_CC_2 596 621 IPR006553 -
Alju07g2222 655 SMART LRR_CC_2 411 436 IPR006553 -
Alju07g2222 655 SMART LRR_CC_2 544 569 IPR006553 -
Alju07g2222 655 SMART LRR_CC_2 465 489 IPR006553 -
Alju07g2222 655 FunFam EIN3-binding F-box protein 1 77 114 - -
Alju07g2222 655 SUPERFAMILY RNI-like 338 651 - -
Alju07g2222 655 CDD F-box_AtTIR1-like 78 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2222 Alju-ChrAlju07 48236923 48239496 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g2222 07 48236923 48239496 Alju08g0802 08 6031125 6033800 CCT
Alju07g2222 07 48236923 48239496 Alju07g2222 07 48236923 48239496 ECH