Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2208 ATGCCTGCTACAAGCTGGCAGCATGCTCAACGTGATTTTGCGCCCAAGGAGAGCCCTAGAAGTCGACGATCTCCGGCGGTGCCATTTCCTTCCTTCACGATCATGGATGGCATTTTCTCCCGGAAAGGTTTTTCGTATCGTAAGCTTCCTTCTGAGCCTCTCAGGCTCTCTGTTCTCAAATTGGATGGCTCTTGCTTCGATATTGTGGTTACCAAGACGGCCACTATCGCAGAACTTAGGCAAGCAGTGGAGGCAGTTTTCAGTCACATGCCTAAGAAGGGACCAGGGAAAATTTCATGGCCGCATGTTTGGGGCCAATTTTGTTTATGCTATGATGGACAGAAGCTAGTTACAGAAACAGATCATCTTAGAAACTACGGCATCAAGGATGGTGACCAGCTTCGTTTCATCCGACATGTCTCAAATAGATGCAATGTGAGAAGGAGAAGATACAAGAAACGTATTGTTATTTCAAAACAAAAAAGGGGGTCTTCTTCGAAAGTAAGTAGCTATCAGCAGAAAGATCATGATGGCGGTGAGAGTGATGATGAAATTGGTTTGGAAAGCATAGTGATAGAGAAGGGGAAGATTCAGCGTTTCAATGATGATGAAGATGGCGTTAAGAATCTTGAAAAGAAGCTAACAAGCTTCTGGAGAGGGTTAGTCACATGCTCGCGACTTGCAGTCATGAGAAAAAATAGAACCGAAGGCCGGATATGTCCCGGGAGGCTTGCTCGAGGCTTATTGCGCAGTTTTAGGAAGATAAGCTTTTACAGGAAAAAACGATTTTATAGAAAACATGCGGAGATTGAATGGCCGAAAAAGGAGAAGGATTGCGTTGGGAACCGACCCGGCCCAGTAATAATTGGGAACTACTCGCACGTGCCGTGCGTCCATTTGTCAGCGTGCAAGGCTGAGGCTGAGACTGAGACTGAAGAGATTGAAATCCGAATCCGAAGCTGCAAAACGCATTCATCAGCTGGCATGGCCAACATGATCATGGCCTCTTCGAAAGCTCTGATTCCCGTTTCGTCCATTTCCCCTTCCCCAAAAGTTCCAGTGCTGCAAATCTCACTCCCCAAAACCCCTCTCCTCAAAATCTGCAAGCCCCAACTCTTATCCCTCGTTCCCTCCACCCTCAAATCCATTTCCCTCCTCGCCGCCTCCTCTCTGGCCTTCGCCCCGCCGTCTCTCGCCGAAGAAATCGAGAAGGCCGCTCTCTTCGACTTCAATTTGACCCTCCCTCTCATCATGGCTGAGTTCCTTCTCCTCATGGTGGCCCTCGACAAGCTATACTTCACCCCTCTCGGCACCTTCATGGACCAAAGGGACGCCGCCATCCGTGAGAAGCTGAGCAGCGTCAAGGACACCTCCGGGGAGGTGAAGCAGCTGGAGGAACAGGCTGCCGCTGTCATGAAGGCCGCCAGGGCTGAGATCGCTGCCGCTCTCAATCAGATGAAAAAGGACACTCAGGCCGAGGTGGAGCAGAAGATCGCTGAAGGCAGGAAGAAAGTGGAGGCCGAGTTGCAGGAGGCTTTGACCAGCTTGGAGAGGCAAAAGGAAGACACCATCAAGTCCCTTGATTCCCAAATCCAAAATCTTAGCCAAGAGATTGTTAAGAAGGTTCTTCCTACTGTTTAA 1641 0.4948 MPATSWQHAQRDFAPKESPRSRRSPAVPFPSFTIMDGIFSRKGFSYRKLPSEPLRLSVLKLDGSCFDIVVTKTATIAELRQAVEAVFSHMPKKGPGKISWPHVWGQFCLCYDGQKLVTETDHLRNYGIKDGDQLRFIRHVSNRCNVRRRRYKKRIVISKQKRGSSSKVSSYQQKDHDGGESDDEIGLESIVIEKGKIQRFNDDEDGVKNLEKKLTSFWRGLVTCSRLAVMRKNRTEGRICPGRLARGLLRSFRKISFYRKKRFYRKHAEIEWPKKEKDCVGNRPGPVIIGNYSHVPCVHLSACKAEAETETEEIEIRIRSCKTHSSAGMANMIMASSKALIPVSSISPSPKVPVLQISLPKTPLLKICKPQLLSLVPSTLKSISLLAASSLAFAPPSLAEEIEKAALFDFNLTLPLIMAEFLLLMVALDKLYFTPLGTFMDQRDAAIREKLSSVKDTSGEVKQLEEQAAAVMKAARAEIAAALNQMKKDTQAEVEQKIAEGRKKVEAELQEALTSLERQKEDTIKSLDSQIQNLSQEIVKKVLPTV 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2208 546 CDD ATP-synt_Fo_b 413 543 - -
Alju07g2208 546 Hamap ATP synthase subunit b [atpF]. 408 545 IPR002146 GO:0015078|GO:0015986|GO:0045263
Alju07g2208 546 Hamap ATP synthase subunit b' [atpF2]. 407 544 IPR034679 GO:0015078|GO:0015986|GO:0045263
Alju07g2208 546 Coils Coil 502 537 - -
Alju07g2208 546 PANTHER U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 25 KDA PROTEIN 362 488 IPR039690 GO:0000398|GO:0005689
Alju07g2208 546 CDD Ubl_SNRNP25 54 139 IPR040610 -
Alju07g2208 546 Coils Coil 447 500 - -
Alju07g2208 546 MobiDBLite consensus disorder prediction 158 183 - -
Alju07g2208 546 Gene3D - 49 146 - -
Alju07g2208 546 SUPERFAMILY Ubiquitin-like 50 143 IPR029071 -
Alju07g2208 546 MobiDBLite consensus disorder prediction 1 28 - -
Alju07g2208 546 Pfam ATP synthase B/B' CF(0) 414 543 IPR002146 GO:0015078|GO:0015986|GO:0045263
Alju07g2208 546 Pfam Ubiquitin-like domain 54 140 IPR040610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2208 Alju-ChrAlju07 48122453 48126753 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g2208 07 48122453 48126753 Alju07g2208 07 48122453 48126753 ECH