Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2029 ATGGCCTCATCAGAATCACGCCCTCAGGGTCTAACACCAGAAGAATTCGCAGAACTTGAGCCCGTCATCCAAAAATACCACAAATTCGAGCCTTCCCCCAACACGTGCACTTCCATTATAACCCAACGAATCGAGGGTCCGGCCCGCAGAGTGTGGCCTCTGGTTCGCACCTTCGACAACCCTCAGAAGTACAAGCACTTCATCAAGAGTTGCGACATGAAGGGTGACGGCGGCGTTGGCAGCATTCGTGAGGTCACTGTCGTCTCCGGCCTCCCGGCCTCCACCAGCACCGAGAGGCTGGAGATGTTGGACGACACCAAGCACATACTCAGCTTTAGGGTCGTCGACGGCGAACACCGCCTCAAGAATTACCGCTCCTTCACGTCGGTGAATGAGTTCGAGAAGGAGGGGAAGGTGTATACGATTGTGTTGGAGTCTTATATCGTCGACATACCGGAGGGCAATACCGGCGAAGATACGAAGATGTTTGTGGACACCGTCGTGAAGCTCAACCTTCAGAAGCTTGGGATCGTGGCCATGGCCACGCCGCCGCTTCCTCAAGATTAG 567 0.5485 MASSESRPQGLTPEEFAELEPVIQKYHKFEPSPNTCTSIITQRIEGPARRVWPLVRTFDNPQKYKHFIKSCDMKGDGGVGSIREVTVVSGLPASTSTERLEMLDDTKHILSFRVVDGEHRLKNYRSFTSVNEFEKEGKVYTIVLESYIVDIPEGNTGEDTKMFVDTVVKLNLQKLGIVAMATPPLPQD 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2029 188 Pfam Polyketide cyclase / dehydrase and lipid transport 41 175 IPR019587 -
Alju07g2029 188 CDD PYR_PYL_RCAR_like 36 175 - -
Alju07g2029 188 PANTHER - 35 176 - -
Alju07g2029 188 SUPERFAMILY Bet v1-like 36 175 - -
Alju07g2029 188 Gene3D - 1 182 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2029 Alju-ChrAlju07 46550341 46550907 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g2029 07 46550341 46550907 Alju08g0958 08 7278509 7279072 CCT
Alju07g2029 07 46550341 46550907 Alju07g2029 07 46550341 46550907 ECH