Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2001 ATGGCAGATCACTACACTCTTTGCGGGATCTTTTTCTCTGCTTTGCTCGCCTTGGTTGTTCTCTACAATTTTGTTTTTGCCAGGAAGAGCCGTATTGTTTCCTCCGCCGCTTCACCTCAATGCATGAATAGCATAACCACCACTGCCGGAGAATGCAGTTCCCCTGACAGAAGCGGTGAGGTTGATGTCATTATCGTCGGGGCTGGTGTTGCTGGCTCTGCTCTGGCGCACACTCTTGGCAAGGATGGACGCCGAGTACATGTTGTAGAAAGAGATTTGAGTGAGCCTGACCGAATTGTTGGGGAGTTGCTGCAACCGGGGGGCTATCTCAAACTAATTGAGCTTGGGCTTGAAGATTGTGTGAAGGAAATTGATGCTCAGCAAGTTTTTGGGTACGCTCTTTACAAGGATGGAAAAAATACTCGACTCCCATATCCATTGGAGAAGTTTCATTCAGATGTTTCTGGAAGAAGCTTTCACAATGGACGATTTATTCAGAGGATGAGAGAGAAGGCTGCCTCCCTTCCCAATGTACAATTGAAGGAAGGAACAGTTACTTCCCTACTTGAAGAGAATGGGACAATTAAAGGTGTCCATTATAAGACGAAAGATGGCCAAGAATTTTCAGCTTATGCTCCACTTACCATTGTTTGTGACGGGTGTTTTTCAAACTTGCGCCGTTCTCTTTGTAATCCCAAGGTAGACGTTCCCTCTTGTTTTGTTGGTTTGATATTGGAAAACTGTGAACTTCCATATGCAAACCATGGTCATGTTATACTAGCAGATCCTTCACCAATTTTGTTCTATCCTATAAGTAGCACGGAGATTCGTTGTCTGGTTGATGTACCTGGTCAGAAGGTTCCTTCAGTTTCAAATGGTGAAATGAGCAAGTATTTGAAGACAGTGGTAGCTCCACAGGTCCCCTCTGAGCTTTATGAGGCTTTCATAGCTGCGGTGGACAAAGGTAACATCAGGACAATGCCAAACAGAAGCATGCCGGCAGCTCCTTATCCTACACCTGGAGCCCTTCTAATGGGAGATGCATTCAATATGCGCCATCCTCTTACTGGGGGTGGAATGACTGTGGCCCTTTCTGACATAGTTGTGCTCCGGAATCTCCTCAAGCCTTTACATGACCTAAATGATTCATACACGCTTTGCAAATATCTCGAGTCCTTCTATACCTTGCGGAAGCCAGTGGCATCCACCATAAATACGTTGGCGGGAGCCCTATACAAGGTGTTTAGTGCATCTCCTGATAAGGCGAGGAGTGAAATGAGGCAAGCATGCTTTGATTATCTGAGTCTGGGAGGTGTATTCTCGGAAGGACCAATTTCTTTGCTTTCTGGACTGAACCCCCGCCCCCTAAGCTTGGTTCTCCATTTCTTTGCTGTTGCAATATACGGTGTTGGCCGTTTGTTGATCCCATGTCCGTCGCCCAATCGGGTTTGGATCGGAGCACGGTTGATATCCAGTGCTTCAGGAATAATCCTCCCCATAATCAAGGCGGAAGGAGTTCGCCAGATGTTCTTCCCTGCGACCGTCCCAGCTTATTACAGGACACCTCCGTCTAAACAGGAGTGA 1584 0.4678 MADHYTLCGIFFSALLALVVLYNFVFARKSRIVSSAASPQCMNSITTTAGECSSPDRSGEVDVIIVGAGVAGSALAHTLGKDGRRVHVVERDLSEPDRIVGELLQPGGYLKLIELGLEDCVKEIDAQQVFGYALYKDGKNTRLPYPLEKFHSDVSGRSFHNGRFIQRMREKAASLPNVQLKEGTVTSLLEENGTIKGVHYKTKDGQEFSAYAPLTIVCDGCFSNLRRSLCNPKVDVPSCFVGLILENCELPYANHGHVILADPSPILFYPISSTEIRCLVDVPGQKVPSVSNGEMSKYLKTVVAPQVPSELYEAFIAAVDKGNIRTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLKPLHDLNDSYTLCKYLESFYTLRKPVASTINTLAGALYKVFSASPDKARSEMRQACFDYLSLGGVFSEGPISLLSGLNPRPLSLVLHFFAVAIYGVGRLLIPCPSPNRVWIGARLISSASGIILPIIKAEGVRQMFFPATVPAYYRTPPSKQE 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2001 527 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 62 84 - -
Alju07g2001 527 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 339 354 - -
Alju07g2001 527 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 354 370 - -
Alju07g2001 527 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 211 226 - -
Alju07g2001 527 Pfam NAD(P)-binding Rossmann-like domain 65 91 - -
Alju07g2001 527 PANTHER SQUALENE MONOOXYGENASE 22 523 IPR040125 GO:0004506|GO:0016126
Alju07g2001 527 SUPERFAMILY FAD/NAD(P)-binding domain 61 435 IPR036188 -
Alju07g2001 527 Gene3D - 55 435 IPR036188 -
Alju07g2001 527 Pfam Squalene epoxidase 212 483 IPR013698 GO:0004506|GO:0016020|GO:0050660
Alju07g2001 527 FunFam Squalene monooxygenase 2 55 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2001 Alju-ChrAlju07 46276787 46280811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2001 44 527 Miscellaneous Gene Families AT1G58440 79.012 0.0 813
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g2001 07 46276787 46280811 Alju07g2001 07 46276787 46280811 ECH