Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1954 ATGGCGTCGAGTTTCGATCGATGGGAAAAAGATCCTTTCTTTCCGGCGGCTGAAGAGGTTCAGGAATCTGCAGACAGGATGGAATCTACTTACCGGACATGGACGCACGCCAAAAACGATGCTTCCAGTAGGTGGGATTCTGAGGAACTCCGCAGAGATCTGCAAACTTCTCTCGGCACTGCAAAATGGCAGTTAGAGGAATTTGAACGGGCAGTTAGTACAAGTTATGGCAAAAGCTCAAGCGATGAAGCACGGAATAGGCACCGAGATTTTATAGCTGCCATTCAGGAAAAAGTTAGAAAGGTAGAGAAGTCTTTGCAGGAATCCACTGTCTCAGATGGCAAGGCACCTCTGCCTTGGGTGCATCTGAATGAAGGAGAACGGAATGAGCTCGCATTATTTCTTTCAGGAACCCCTACAAAAAGTAAAGGTAGGGATGATGAGTGTAAACAATTAAGTGATAAAGATTCAGGTAGTATTTCAAAAAATCCACTTTCATCTGAATGGAATCCCTCGGAAACAAAGGATCATAGTTCACATGGGCATCGTAGGATAGCTAGTGCAAGTGCCGATTTTAGTTCATGGAAGATTGCAGTGTCTGATGATGTCCAACCATATAGTTCTTCCAATGGATCTTCTGGTCTTGTGCACAAGGTTTCCAGTTTTTCAGGATTTTTTAATTCCATGGAATCTGTTCCTGAGATCAAGTGGCCTAAGAATGCATTTAGAAAACTAAAAGCCTTGGATAATAATCAAGGAGCTGACAGTGCATTGCTGCCATCATCAGAATTGAACAGGGGCATCAGTGTGTGCTATGAAAGAAGTAAGAGTTACCTTGATAGTGATGATAAATGCTACGACAAGCAATTATACGGGTGGTATGGAGCTATACAAAGACAGCTTCAAAGGTCCCAGTACCTAATGCAATACAGTCGACCTGTTCTAGTAGTTTTCTGGATGGTTCTTTCCTTCAGCTTGATTGTTTTAGTTGCATTCCGTGCGGTTTAG 1008 0.4306 MASSFDRWEKDPFFPAAEEVQESADRMESTYRTWTHAKNDASSRWDSEELRRDLQTSLGTAKWQLEEFERAVSTSYGKSSSDEARNRHRDFIAAIQEKVRKVEKSLQESTVSDGKAPLPWVHLNEGERNELALFLSGTPTKSKGRDDECKQLSDKDSGSISKNPLSSEWNPSETKDHSSHGHRRIASASADFSSWKIAVSDDVQPYSSSNGSSGLVHKVSSFSGFFNSMESVPEIKWPKNAFRKLKALDNNQGADSALLPSSELNRGISVCYERSKSYLDSDDKCYDKQLYGWYGAIQRQLQRSQYLMQYSRPVLVVFWMVLSFSLIVLVAFRAV 335
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1954 335 SUPERFAMILY t-snare proteins 10 108 IPR010989 GO:0016020|GO:0016192
Alju07g1954 335 Pfam Syntaxin 6, N-terminal 11 103 IPR015260 GO:0016020|GO:0048193
Alju07g1954 335 CDD SNARE_NTD_STX6-like 11 106 - -
Alju07g1954 335 PANTHER OS05G0443700 PROTEIN 1 326 - -
Alju07g1954 335 MobiDBLite consensus disorder prediction 156 172 - -
Alju07g1954 335 MobiDBLite consensus disorder prediction 141 155 - -
Alju07g1954 335 Gene3D - 9 110 - -
Alju07g1954 335 FunFam Syntaxin 10 8 109 - -
Alju07g1954 335 MobiDBLite consensus disorder prediction 135 183 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Alju07g1954 Alju-ChrAlju07 45788802 45791930 Dispersed/Transposed
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g1954 07 45788802 45791930 Alju07g1954 07 45788802 45791930 ECH